Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02157 GCTATAGCTGTGTTAAGTGAAGTAGTCAGACTGGAACCAAATTTACCTGACCCATATCACATCCTTGGACTTGTCCATAGTGCAATTGGGGATTATGAAAAAGAAATGGGTTTCTACATGATTGCTGCTCTTTTGTCTCCAAAGGATCCATCGCTTTGGAAAATTCTCTTTGCGTGGTGCATAGAACAAGATAATATTCCTCATGCCAATTATTGTCTTATAAGAGCAATTAAAGCAGACCCCGAAGATAGTTCTCTTAGAAGTCATCAAGCAATGTTTTATGCTGAACTTCAAGATTATCAAAAAGCTGCTGTGGCATATGAACAAGTATATCAACTTTGTTCTGAAAATGTTGATGCACTAAAAGCAGCAGCTAAGTTCTACCAAAAGTGCGGTCAAGTTGAACGCTCAGTTTTCATTCTCGAAGACTATCTGAAGAGTCAACCAGATGGAGTACATGCAAGTGTAGTTGATCTACTCAGTAACATATTAATGGAAATTAAGGCGCATGACAGAGCTCTTCAGTACATTGAACGATTTCAAATTGGGGGAAAAGAATTGCCCTTAAATTTGAAAGTTAAAGCTGGAATCTGCCATGTTCATCTTGGAAACATGGAGATTGCTCAGGTTTTCTTTAATGATTTGAAACCGGAGAATGCAAACACACATAGTGACTTGATCACTGAGGTTGCGGATTCATTAATGGGTCTTGGACATTTTAGTTCTGCATTGAATTATTTTCTGATATTGAAAGGAAATAGTAAAACTGAAAATGGTCTTCTGTATTTGAAAATTGCTAGATGTTATCAATCCTTGGGAGAAAGGTTACAAGCAATTCTCTCTTTTTCCAAAGCCCTAGAGACACTACAAGATGATGTCGAAGCACGCATAACTTTGGCTTCCCTTCTAGTTGAGGAAGGGAAAGACAATGATGCCATTTCCTTGCTGTCTCCTCCGAAGGATTCTGACTCGGGTGAAGCACATTCTGAAAAGTCAAATAGATGGTGGGTTGATGTGAGAATTAAACTTAAGCTCTGCAAAATATTTCAGAATAGAGGGATGCTTAATGATTTTGTGGATGTAAGTTTCCCTCTGGTACATGAATCGCTGCAGGTTGCAACTCATAGACAACAGGGTACATCAAAAAAGCGCCTCTCTAAAAGAGATCTGATTAAAAGGGTGAGGCTACTGGGTGGTCCAGAAACAGATACTTTGCTTCAAGGATTCAGGCCCCTAGCTTCAGCATCTGATCTGTTGAAAGCTTCCAGAGCAAAAAAGTTGCTCCAGAAGAAGGCAATTGAGAAGGAGAAAAAAAAAGCCGAGGCAGTAGCTTCTGGAATTGATTGGCTAAGTGATGATTCAGATGATGAGCCTCAGAAACCAAACACAGAACCGCCCTTGTGTAATCTTCACAAAGATGAAGAATATCACCAGTTAATTATTGATTTGTGTAATGCATTAGCATCCTTGCAAAGGTATAGGGAAGCATTAGAGATTATTAATATCACTGTAAGATCGGCTCATATTTCTCTGTCTGCTGAGAATAGTAAGAAGCTTCGATCTCTTGGAGCTCAAATGGCATACAACACCACAGATCCTAAACATGGTTTTGATTGTGTAAAAGACATTGTTCAACAACATCCACAGAATGTTGCAGCTTGGAATTGCTACTACAAGGTCATATCTAGATTGGAAAACCGAGATACGAGACACGACAAATTTTTGCGTAATATGCAAGGAAAATTTGTTGATTGTGTGCCTCCTATCCTCATTTCTGCACATCAGTTTACTCTATGTAGTCATCATCAAGACGCAGCAAGAAAATACCTTGAAGCTTATAAACTTTTGCCCGAGAATCCCTTGGTTAATCTTTGTGTTGGAACGGCCTTGATCAACGTGGCGCTGGGTTTCAGGCTTCAAAACAGGCATCAGTGTGTTGTACAAGGTTTAGCATTCCTCTACAATAATTTGAGGATCTGTGAGAACAGCCAGGAATCTTTATACAACATAGCTCGGGCATACCATCATGTTGGTCTTGTGACACTGGCAGCAATATATTATGAGAAGGTGATTGCTATTAATGAGAAAGACTATCCAATTCCAAAACTTCCCAATGAGAATATTGATATCTCTGAAAATCATAAACCTGGTTACTGCGACCTTCGCAGAGAGGCGGCTTACAATTTGCATTTAATCTACAAAAGGAGCGGGGCTCTTGATCTTGCTAGGCAAGTTTTAAAAGATCATTGTTCCTTTTGA 2259 0.3935 AIAVLSEVVRLEPNLPDPYHILGLVHSAIGDYEKEMGFYMIAALLSPKDPSLWKILFAWCIEQDNIPHANYCLIRAIKADPEDSSLRSHQAMFYAELQDYQKAAVAYEQVYQLCSENVDALKAAAKFYQKCGQVERSVFILEDYLKSQPDGVHASVVDLLSNILMEIKAHDRALQYIERFQIGGKELPLNLKVKAGICHVHLGNMEIAQVFFNDLKPENANTHSDLITEVADSLMGLGHFSSALNYFLILKGNSKTENGLLYLKIARCYQSLGERLQAILSFSKALETLQDDVEARITLASLLVEEGKDNDAISLLSPPKDSDSGEAHSEKSNRWWVDVRIKLKLCKIFQNRGMLNDFVDVSFPLVHESLQVATHRQQGTSKKRLSKRDLIKRVRLLGGPETDTLLQGFRPLASASDLLKASRAKKLLQKKAIEKEKKKAEAVASGIDWLSDDSDDEPQKPNTEPPLCNLHKDEEYHQLIIDLCNALASLQRYREALEIINITVRSAHISLSAENSKKLRSLGAQMAYNTTDPKHGFDCVKDIVQQHPQNVAAWNCYYKVISRLENRDTRHDKFLRNMQGKFVDCVPPILISAHQFTLCSHHQDAARKYLEAYKLLPENPLVNLCVGTALINVALGFRLQNRHQCVVQGLAFLYNNLRICENSQESLYNIARAYHHVGLVTLAAIYYEKVIAINEKDYPIPKLPNENIDISENHKPGYCDLRREAAYNLHLIYKRSGALDLARQVLKDHCSF 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02157 752 MobiDBLite consensus disorder prediction 448 469 - -
Car06g02157 752 Gene3D Tetratricopeptide repeat domain 187 325 IPR011990 GO:0005515
Car06g02157 752 Gene3D Tetratricopeptide repeat domain 1 183 IPR011990 GO:0005515
Car06g02157 752 SUPERFAMILY TPR-like 527 746 IPR011990 GO:0005515
Car06g02157 752 SMART tpr_5 84 117 IPR019734 GO:0005515
Car06g02157 752 SMART tpr_5 16 49 IPR019734 GO:0005515
Car06g02157 752 SMART tpr_5 259 292 IPR019734 GO:0005515
Car06g02157 752 SMART tpr_5 664 697 IPR019734 GO:0005515
Car06g02157 752 Pfam Tetratricopeptide repeat 665 697 IPR019734 GO:0005515
Car06g02157 752 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED 1 752 IPR039340 GO:0006383
Car06g02157 752 Gene3D Tetratricopeptide repeat domain 403 749 IPR011990 GO:0005515
Car06g02157 752 SUPERFAMILY TPR-like 3 315 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02157 Car-Chr6 22007018 22037256 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02157 K15201 - gmx:100804533 1159.82