Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02133 ATGGTTCCACCGGCGGTTCAATCGCCGAACCCACAAGAAACCCAACAATTCCTAAGCTCCGTTCTCTCCCAACGCGGTCCATCAGCAGTACCCTACTCCGAAGACACTAAATGGCTCATCCGTCAACACTTACTCACTCTTATCACAACCTTCCCTTCTCTCGAACCCAAAACCGCTACTTTCACTCACAACGACGGTCGCACCGTCAATCTCCTCCAAGCCGACGGTACTATTCCGATGACCTACCAATCCGTCACTTACAACATCCCCGTCGTCATTTGGCTCATGGAATCTTACCCTCGTCACCCTCCTTGTGTTTATGTTAACCCTACCCGAGACATGATTATTAAACGCCCTCACCCTCATGTTAACCCTTCTGGTTTAGTTTCTGTCCCTTATTTGCATAATTGGATCTACCCTAGTTCCAATTTAGTTGATCTTGTTCTTTCTTTGAGTCTCATCTTTGGTCGCGACCCTCCTCTTTATTCCCAACGTAGAcctaaccctaaccctaatcccaatcccaattccatttccaatcttcatcatagtcatagtcataatcataatcctaatcaaaatctcaatccaagttctaatTTTGCAGCTTCTAATCCATCTGGATATACTCACCCTCCTAGAAGTTACCCTCCTTCGCCTTATTCTCCTTCTCCTCCGCCATCTCGGCCTTCTCATACGGAGGATCCAACTGAGGTTTTCAGGAGGAATGCTATTAACAAGCTTGTGGAGATGGTGCATAATGATGTTGCGTCGTTGAGGAAGACTACCGAGGTTGAAACGGAGGGTTTGTTTGGTGTGCAAGGGGTTTTGAAGCAGCGTGAGGAGGGTCTTAATAAAGGTGTGAAGGAAATGCAAGAGGAGATGGAGGGTTTGGAACAACAACTTCAGATGGTTTTGATGAATACTGATGTTTTGGAGGGTTGGTTGAAGGATAATCAAGGGAAGAAATTGGGTAGTTTGGAGAATGTTGAGGATGCTTTTGAGTGTGTGGATGTTCTTTCGAAACAGATGCTTGATTGTACTGCTGCTGATTTGGCTATTGAAGATACTCTTTATGCTTTGGATAAGGGAGTTCAAGTCGGGGCTGTACCATTTGATCAGTACTTGAGGAGTGTGAGGGTGCTGTCAAGGGAGCAGTTCTTTCACCGAGCTATCGCTGCTAAAGTTAGAGCTGCTCAGTTGCAGGCTCAGGTTGCTAATATGGCTGCTCGGAATCATCATTATGGTGGTAGCTGA 1257 0.428 MVPPAVQSPNPQETQQFLSSVLSQRGPSAVPYSEDTKWLIRQHLLTLITTFPSLEPKTATFTHNDGRTVNLLQADGTIPMTYQSVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSGLVSVPYLHNWIYPSSNLVDLVLSLSLIFGRDPPLYSQRRPNPNPNPNPNSISNLHHSHSHNHNPNQNLNPSSNFAASNPSGYTHPPRSYPPSPYSPSPPPSRPSHTEDPTEVFRRNAINKLVEMVHNDVASLRKTTEVETEGLFGVQGVLKQREEGLNKGVKEMQEEMEGLEQQLQMVLMNTDVLEGWLKDNQGKKLGSLENVEDAFECVDVLSKQMLDCTAADLAIEDTLYALDKGVQVGAVPFDQYLRSVRVLSREQFFHRAIAAKVRAAQLQAQVANMAARNHHYGGS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02133 418 MobiDBLite consensus disorder prediction 175 210 - -
Car06g02133 418 PANTHER PROTEIN ELC-LIKE 4 183 - -
Car06g02133 418 PANTHER PROTEIN ELC-LIKE 184 417 - -
Car06g02133 418 ProSiteProfiles Steadiness box (SB) domain profile. 338 406 IPR017916 -
Car06g02133 418 MobiDBLite consensus disorder prediction 162 236 - -
Car06g02133 418 Gene3D Ubiquitin Conjugating Enzyme 5 162 IPR016135 -
Car06g02133 418 Coils Coil 281 308 - -
Car06g02133 418 ProSiteProfiles UEV domain profile. 21 165 IPR008883 GO:0015031|GO:0036211
Car06g02133 418 Gene3D - 339 399 - -
Car06g02133 418 Pfam UEV domain 41 161 IPR008883 GO:0015031|GO:0036211
Car06g02133 418 MobiDBLite consensus disorder prediction 211 232 - -
Car06g02133 418 SUPERFAMILY UBC-like 24 161 IPR016135 -
Car06g02133 418 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 4 183 - -
Car06g02133 418 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 184 417 - -
Car06g02133 418 SUPERFAMILY Endosomal sorting complex assembly domain 338 398 IPR037202 -
Car06g02133 418 Pfam Vps23 core domain 333 395 IPR017916 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02133 K12183 - gmx:100778834 580.867