Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02118 ATGGAGAGTGGTTCAAACACAGGGAAGGGGAAAAGTATTAGTGGTGGTGGAAACACAGTTGAGGTTCTAGATGGTTCTAATATTATGGAGTTGGTTGGAAACAAAGATGTTTTCACCAAATTCGTGAACCATAAGTTTCATGAGTTGGATACAGACAAAGATGGTAAACTCTCTGTGAAAGAACTTCAACCTGCTGTTGCTGATATTGGTGCTGCTCTTGGTTTACCTGCTCAAGGCTCTGCTCCTGATTCTGATCACATCTATTCTCAGGTGTTGAATGAATTCACACATGGAAAGCAAGAAAAAGTGAGCAAAACAGAGTTCAAAGAGGTTCTCTCAGACATTCTATTGGGCATGGCTGCTGGACTTAAACGAGACCCAATTGTGATACTTCGCATTGATGGAGAAGATCTTCTTGAGTTTCTCAATGGTTCAAGTTATGAACCGGAAATGGTTTCCATATTCTCTCAAATTGAATCACCTCACAAATCACTTCATGACCATATAATTCAAGCTCTTGCCAAACTCAATGTTGACCATGGGATTCCTCCTACTTCTGATTCTTGGGTTATTAGCAACATTGTGGAACCAGCAATGATTTCTGAACATGGGTTTGACTTGGATAAGGCTGTTTCTGAAGAGATATTTTTGGAGGAATTTAAGAAAGTGGCAATGAGGGTGGCCATTCGTCTTAAGGAGCAACCAGTTATAGTTGCTCATAGTGAAAGCACATTTGATGGAAGTGGTATTAAGAGATTATTATCCAACAAGTTTGAATTAGATAAGATTTTGAGCTCAGCTATGGAGACTTTGCCTAAAGATCGAAATGGAAAAATGTCAAAGGAATATCTAAGGGTAGCTTTGGATGTGGTGGCTCCATCTGCTAGTTTACCTCCATTTGGTGCAATTCAAGAGATGGACATGGTTATTGGTGAAGTGTTTAAGATGATAAATGCAGATGATGGGAAATTGGTGAAAGAAGACGAATTTAAGAAATTATTAACTGAAATATTGGGGAGTATGATGTTGCAATTGGAAGGAAATCCAATATCAGTTGCTTCAAATTCAGTTGTGCATGAGCCTCTAGACTCCTCTTCTACACTTCTGCAGCCATCCCCTAATGTTGAAACAGCATAG 1137 0.3931 MESGSNTGKGKSISGGGNTVEVLDGSNIMELVGNKDVFTKFVNHKFHELDTDKDGKLSVKELQPAVADIGAALGLPAQGSAPDSDHIYSQVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFLNGSSYEPEMVSIFSQIESPHKSLHDHIIQALAKLNVDHGIPPTSDSWVISNIVEPAMISEHGFDLDKAVSEEIFLEEFKKVAMRVAIRLKEQPVIVAHSESTFDGSGIKRLLSNKFELDKILSSAMETLPKDRNGKMSKEYLRVALDVVAPSASLPPFGAIQEMDMVIGEVFKMINADDGKLVKEDEFKKLLTEILGSMMLQLEGNPISVASNSVVHEPLDSSSTLLQPSPNVETA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02118 378 ProSitePatterns EF-hand calcium-binding domain. 50 62 IPR018247 -
Car06g02118 378 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 373 - -
Car06g02118 378 SUPERFAMILY EF-hand 44 348 IPR011992 -
Car06g02118 378 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 373 - -
Car06g02118 378 SMART efh_1 309 337 IPR002048 GO:0005509
Car06g02118 378 SMART efh_1 263 291 IPR002048 GO:0005509
Car06g02118 378 SMART efh_1 41 69 IPR002048 GO:0005509
Car06g02118 378 Gene3D - 34 341 - -
Car06g02118 378 ProSiteProfiles EF-hand calcium-binding domain profile. 37 72 IPR002048 GO:0005509
Car06g02118 378 Pfam EF-hand domain pair 44 111 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02118 Car-Chr6 21628216 21633375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02118 21 377 EF-hand Containing Proteins AT4G38810 68.333 5.63e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02118 - - gmx:100820516 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02118 06 21628216 21633375 Car06g02118 06 21628216 21633375 ECH