Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02116 ATGGGGAGTGTTTCCTCCGAAGAAGTTTCTGACCGATGCGGTAGTTACAGTCCCAGTGCTGACATCAGCGAATCGGAGAGTTGCAGCAGTTTCTATGTTCGCCGTTTCGATGCCGAGGGAGCATCCAGTTCTGCTAATCTCTCTCCCCGTCCGCTCGCCGCACATTTCAACCTACCGCCGGCGGCGCAGGTTATGCTTCCGGTCATCGGAGGAAAAGACGTCGTCGTTTGGGATCACAAGCGTGACCTGGATTTGTCCGAAGTGGAAATGATGAAGGAACGTTTCGCTAAGCTGCTTTTAGGGGAAGATATGTCTGGTGGTGGAAAGGGGGTTTGCACTGCGCTTGCAATCTCCAACGCAATCACGAATCTCTCTGCAACTGTGTTTGGCGAGTTATGGAGGTTGGAACCACTGGCACCACAGAAAAAATCAATGTGGCGTAGGGAAATGGAATGGCTACTATGTGTGAGTGATTCAATTGTGGAGCTGGTGCCTTCTGTGCAGCAGTTTCCAGGTGGTGGAACCTATGAAGTGATGGCCACACATCCTCGTTCCGATTTGTACATCAATCTTCCTGCTTTGAAGAAGCTTGATGGAATGTTGCTTGGTATGCTAGATGGTTTTTGTGACACGCAGTTTTGGTATGTTGATAGAGGAATTGTATTGGGTGATTCTAAGGATTGTGATGAGTATGGTAGACCTTCTGTTAGGCAAGAAGAGAAATGGTGGCTTCCTTCTCCCAAGCTTCCACCAAATGGGTTGTGTGAGGATGATAGGAAAAGGTTGCAGCAGTGTAGGGATTGTACTAACCAGATACTCAAGGCTGCCATGGCAATTAATAGTTCTGTTCTTGCTGAAATGGAAATTCCTGTCGTCTATATAGAATCCTTGCCCAGGACTGGTAAAGCTTGTCTAGGCGATATAATCTACCGGTACATAACTGCTGATCAGTTCTCGTCTGAATGTCTCCTTGATTGTCTGGATCTATCATCTGAGCACCACACACTGGATATAGCTAATAGAATTGAGGCTGCTATACATGTATGGAGGTTGAAAGACCATAAGAAACATAAAAATTCAGTTAAAGCCAGGCGGTCTTGGGGTGGAAAGGTAAAGAGCCTTGTTGCTGATGGTGAGAAGAACCATTTTCTTGCACAACGGGCAGAGACACTACTGCAAAGCTTGCAACACCGATTTCCTGGGCTCCCTCAAACAGCACTTGATATGGCCAAGATACAATATAATAGGGATGTAGGACAGTCTATTCTTGAAAGTTATTCGAGGGTGATGGAGAGTTTGGCCTTTAACATAATGGCCAGGATAGATGATGTGCTTTATGTAGACGATACTATAAAACAATGTGCAGCTGCAGATTCCATCTTGTTCAGCAGAGGAGGTTTCAGTGGTCTGCCCATCCAGAAGCGAATGTCTCCCAGCCCCTTCTCAATTCAACGCACGCCATATGCCTCTCCTTTTGCAACCCCAACGTTCTGTTCCTCCTCTCCTCTTAGTGGAAGTCCTTGTAGTCCACGTAGGACACACACTGTTAAGAGGAATGCCAAGGGAAAAGATTCGAAGACTGAAAAGTTGCCTTCATCTGATTTTGAGAAGGTATGGTCATACACAGGAAGCCTCAGTGTAAGAAGAGTATCTGGCGAGGCTCCAGAAAGAAACTGA 1677 0.4651 MGSVSSEEVSDRCGSYSPSADISESESCSSFYVRRFDAEGASSSANLSPRPLAAHFNLPPAAQVMLPVIGGKDVVVWDHKRDLDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKSMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATHPRSDLYINLPALKKLDGMLLGMLDGFCDTQFWYVDRGIVLGDSKDCDEYGRPSVRQEEKWWLPSPKLPPNGLCEDDRKRLQQCRDCTNQILKAAMAINSSVLAEMEIPVVYIESLPRTGKACLGDIIYRYITADQFSSECLLDCLDLSSEHHTLDIANRIEAAIHVWRLKDHKKHKNSVKARRSWGGKVKSLVADGEKNHFLAQRAETLLQSLQHRFPGLPQTALDMAKIQYNRDVGQSILESYSRVMESLAFNIMARIDDVLYVDDTIKQCAAADSILFSRGGFSGLPIQKRMSPSPFSIQRTPYASPFATPTFCSSSPLSGSPCSPRRTHTVKRNAKGKDSKTEKLPSSDFEKVWSYTGSLSVRRVSGEAPERN 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02116 558 Gene3D PRONE domain, subdomain 1 320 458 - -
Car06g02116 558 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 558 IPR038937 GO:0005085
Car06g02116 558 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 86 452 IPR005512 GO:0005085
Car06g02116 558 Gene3D PRONE domain, subdomain 1 78 319 - -
Car06g02116 558 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 558 - -
Car06g02116 558 MobiDBLite consensus disorder prediction 1 23 - -
Car06g02116 558 MobiDBLite consensus disorder prediction 501 533 - -
Car06g02116 558 ProSiteProfiles PRONE domain profile. 78 458 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02116 Car-Chr6 21621447 21625740 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02116 - - gmx:100789706 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02116 06 21621447 21625740 Car06g02116 06 21621447 21625740 ECH