Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02083 ATGTTTTGGTTGAGACCCATTTTGCGTTCACATTCACGATCTTCTTCTCTTTGGGTGCTGCACCATTCTTCTAATGGTTATTGCAGTTCCTTTTCAACTTCCTCAGCAGCTGCAATTCATGCTGAGAAAACCATTAACCAAGGACCCAGAAATGATTGGACTAAAGATGAAGTCAAATCCATCTATGACTCTCCCATTCTCGATCTTCTATTCCATGGGGCTCAGGTTCATAGACATGCTCATAACTTTAGGGAAGTGCAACAGTGTACTCTTCTATCTGTTAAAACAGGTGGATGTAGTGAGGATTGTTCTTATTGCCCTCAGTCATCTAGATATGATACAGGACTCAAAGGTCAAAGACTTTTGAACAAGGATGCTGTTCTCCAAGCTGCAACGAAGGCAAAAGAGGCTGGAAGTACTCGCTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGAAAGACCAACTTCAATCAGATACTTGAATATGTAAAAGAAATAAAGGGTATGGGTATGGAGGTGTGTTGCACACTTGGCATGCTGGATAAAGATCAAGCCGGTGAACTCAAGAAGGCGGGTCTTACTGCCTATAATCACAATCTCGACACTTCAAGAGAATACTATCCAAACATCATCACAACAAGGACTTATGATGAACGCCTACAAACCCTCGAGTTTGTTCGTGATGCAGGGATTAATGTTTGTTCTGGAGGAATTATCGGGCTTGGGGAAGCAGAGGAGGACCGTATAGGTTTGTTACATACATTATCAACCCTTCCCTCACATCCAGAGAGTGTTCCTATTAATGCACTTGTTGCTGTAAAAGGAACCCCTCTTGAGGATCAGAAGCCTGTTGAAATATGGGAGATGATTCGCATGATTGCAACTGCGCGTATCACAATGCCAAAGGCAATGGTGAGGTTATCGGCCGGTAGAGTTCGGTTCTCGATGCCTGAGCAGGCACTGTGTTTTCTAGCTGGTGCCAATTCTATCTTTGCTGGTGAAAAACTTCTCACAACTGCTAACAATGATTTTGATGCTGATCAACTAATGTTTAAAGTTCTTGGTCTGCTTCCAAAAGCTCCAAGCTTAAATGAAGATGAGGCAGAGGACTTTAAAGAAGCAGCTTCTTCTAGTTGA 1143 0.4278 MFWLRPILRSHSRSSSLWVLHHSSNGYCSSFSTSSAAAIHAEKTINQGPRNDWTKDEVKSIYDSPILDLLFHGAQVHRHAHNFREVQQCTLLSVKTGGCSEDCSYCPQSSRYDTGLKGQRLLNKDAVLQAATKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKEIKGMGMEVCCTLGMLDKDQAGELKKAGLTAYNHNLDTSREYYPNIITTRTYDERLQTLEFVRDAGINVCSGGIIGLGEAEEDRIGLLHTLSTLPSHPESVPINALVAVKGTPLEDQKPVEIWEMIRMIATARITMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFAGEKLLTTANNDFDADQLMFKVLGLLPKAPSLNEDEAEDFKEAASSS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02083 380 PIRSF Biotin_synth 33 367 IPR024177 -
Car06g02083 380 SFLD biotin synthase like 46 366 - -
Car06g02083 380 SUPERFAMILY Radical SAM enzymes 51 360 - -
Car06g02083 380 ProSiteProfiles Radical SAM core domain profile. 84 313 IPR007197 GO:0003824|GO:0051536
Car06g02083 380 Hamap Biotin synthase [bioB]. 51 361 IPR002684 GO:0004076|GO:0009102
Car06g02083 380 Pfam Biotin and Thiamin Synthesis associated domain 268 358 IPR010722 -
Car06g02083 380 PANTHER BIOTIN SYNTHASE 31 377 IPR002684 GO:0004076|GO:0009102
Car06g02083 380 SMART BATS_2 268 360 IPR010722 -
Car06g02083 380 TIGRFAM bioB: biotin synthase 61 358 IPR002684 GO:0004076|GO:0009102
Car06g02083 380 CDD Radical_SAM 96 296 - -
Car06g02083 380 Pfam Radical SAM superfamily 95 254 IPR007197 GO:0003824|GO:0051536
Car06g02083 380 SFLD biotin synthase 46 366 IPR024177 -
Car06g02083 380 SMART MiaB 89 297 IPR006638 GO:0003824|GO:0051536
Car06g02083 380 Gene3D Aldolase class I 50 362 IPR013785 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02083 K01012 - gmx:732577 659.448