Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02071 ATGACGACGTCGTTCGCAGCAGCGGCACTCAGGGACCCCAAGCTTCAGATCCCGACCTACCATGGTTTAAGGTCCTCATCCGCCGCATCTTCTCTCACTCGCAATGTTCTCTCCGTTCCTTCATCCACTCGCTCCTCCTCATCCCTCATACGAGCTGTTTCCACGCCTGCTAAGTCTGAAACTGCCACTGAGAAGAGAAGCAAAGTTGAGATATTTAAGGAACAAAGCAATTTTATTAGATATCCTCTTAACGAGGATATGTTGACAGATGCACCTAATTTAAGCGAACCTGCTACACAGTTGATCAAGTTTCATGGCAGTTATCAACAGTACAACAGAGACGAGCGTGGCTCTAGAACTTACTCGTTTATGATACGTACTAAGAACCCATGTGGTAAAGTTTCAAACCAACTTTACTTGACCATGGATGATCTTGCTGATCAGTTTGGAATTGGGACGCTTCGTTTGACTACTAGACAAACTTTTCAGCTCCATGGTGTGGTTAAGAAGGACCTTAAAACGGTTATGGGTACCATTATTAGAAATATGGGCTCAAGTCTCGGTGCGTGTGGTGACCTCAATAGGAATGTGCTTGCTCCTGCTGCTCCAATTAAGAGGAAAGATTACCTCTTTGCTCAAGAAACTGCAGAGAACATTGCTGCACTTTTGACTCCTCAATCTGGTTTCTATTATGATATTTGGGTAGATGGGGAAAGAATTATGTCAGCAGAACCTCCTGAGGTAGTTCAGGCACGAAATGACAATTCTCATGGAACAAACTTCCCAGATTCACCTGAGCCTATCTATGGAACTCAGTTCTTGCCGAGGAAATTCAAAATTGCAGTTACCGTGCCGACTGATAACTCTGTGGATATTCTCACAAATGATATTGGTGTTGTTGTTGTTACCGATGATGATGGGGAACCTCAAGGGTTCAACTTATATGTTGGTGGTGGGATGGGAAGAACACATAGGTTAGAATCCACTTTTCCTCGCTTGGCTGAACCATTGGGTTATGTGCCAAAAGAGGATATTTTGTATGCAGTGAAAGCAATTGTTGTTACACAACGAGAAAATGGGAGAAGAGATGACCGCAAGTACAGTAGAATGAAATATCTGATTGACTCTTGGGGAATAGAAAAGTTCAGAAATGTAGTTGAGCAATACTATGGCAAGAAGTTCGAACCTTTCCGCAGCTTGCCAGAATGGGAATTCAAAAGTTATCTTGGATGGCATCAGCAGGGAGATGGTGGATTATATTGTGGGCTTCATGTTGACAGTGGTCGTATTGGTGGAAAAATGAAAACGGCATTGAGGGAGGTTATTGAGAAGTATCATTTGAATGTTAGGATCACTCCAAATCAGAACATCATATTGACTGATATTCGTGCTGCCTGGAAACGTCCCATCACTACCATTCTTTCTCAGGCCGGTCTGCTGCAACCTAAATATGTAGATCCCCTTAATGTAACGGCAATGGCATGCCCTGCTTTCCCATTATGTCCCCTGGCAATTACTGAAGCTGAACGTGGGATACCAAATATTCTTAAGCGGATTCGAGCCATGTTTGAGAAGGTTGGTCTGAAGTATAACGAATCTGTGGTTGTAAGGATAACTGGCTGCCCTAATGGTTGTGCTAGACCGTATATGGCTGAACTTGGACTGGTTGGTGACGGCCCAAATAGTTATCAGGTTTGGCTTGGAGGAAGCAGTGCCCAAACATCATTAGCTCGAAGTTTCATGGACAAGGTGAAGCTTCAAGACCTTGAAAAAGTTTTGGAGCCATTGTTTTATCATTGGAAGCAAAAGCGTCAATCTAAAGAATCATTTGGCAACTTCACAACCCGAGTGGGATTTGAGAAGCTTAAAGAATATATTGAGAAATGGGAGGGTCCAGTAGTAGCACCATCACGCCACAACCTGAAGCTTTTTACCGATAAGGAGACATACGAAGCAATCGATGAGTTAGCTAAGCTTCAAAACAAGACTGCTCATCAGTTGGCCATAGAAGTTATCCGCAATTATGTTGCTTCCAACCAAAATGGAAAAGGTGAATTTTAA 2061 0.4318 MTTSFAAAALRDPKLQIPTYHGLRSSSAASSLTRNVLSVPSSTRSSSSLIRAVSTPAKSETATEKRSKVEIFKEQSNFIRYPLNEDMLTDAPNLSEPATQLIKFHGSYQQYNRDERGSRTYSFMIRTKNPCGKVSNQLYLTMDDLADQFGIGTLRLTTRQTFQLHGVVKKDLKTVMGTIIRNMGSSLGACGDLNRNVLAPAAPIKRKDYLFAQETAENIAALLTPQSGFYYDIWVDGERIMSAEPPEVVQARNDNSHGTNFPDSPEPIYGTQFLPRKFKIAVTVPTDNSVDILTNDIGVVVVTDDDGEPQGFNLYVGGGMGRTHRLESTFPRLAEPLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLIDSWGIEKFRNVVEQYYGKKFEPFRSLPEWEFKSYLGWHQQGDGGLYCGLHVDSGRIGGKMKTALREVIEKYHLNVRITPNQNIILTDIRAAWKRPITTILSQAGLLQPKYVDPLNVTAMACPAFPLCPLAITEAERGIPNILKRIRAMFEKVGLKYNESVVVRITGCPNGCARPYMAELGLVGDGPNSYQVWLGGSSAQTSLARSFMDKVKLQDLEKVLEPLFYHWKQKRQSKESFGNFTTRVGFEKLKEYIEKWEGPVVAPSRHNLKLFTDKETYEAIDELAKLQNKTAHQLAIEVIRNYVASNQNGKGEF 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02071 686 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 412 465 IPR005117 GO:0016491
Car06g02071 686 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 120 176 IPR005117 GO:0016491
Car06g02071 686 Pfam Nitrite and sulphite reductase 4Fe-4S domain 490 628 IPR006067 GO:0016491|GO:0020037|GO:0051536
Car06g02071 686 Pfam Nitrite and sulphite reductase 4Fe-4S domain 216 394 IPR006067 GO:0016491|GO:0020037|GO:0051536
Car06g02071 686 Gene3D Sulfite Reductase Hemoprotein, domain 1 486 633 IPR045854 -
Car06g02071 686 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 488 639 IPR045854 -
Car06g02071 686 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 63 190 IPR036136 GO:0016491
Car06g02071 686 PANTHER BNAA01G31570D PROTEIN 20 631 - -
Car06g02071 686 PRINTS Sirohaem Fe-binding site signature 490 508 IPR006066 GO:0016491|GO:0020037|GO:0051536
Car06g02071 686 PRINTS Sirohaem Fe-binding site signature 539 557 IPR006066 GO:0016491|GO:0020037|GO:0051536
Car06g02071 686 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 409 482 IPR036136 GO:0016491
Car06g02071 686 PANTHER SULFITE REDUCTASE [NADPH] SUBUNIT BETA-RELATED 20 631 IPR045169 GO:0016491|GO:0020037|GO:0051536
Car06g02071 686 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 191 406 IPR045854 -
Car06g02071 686 TIGRFAM sir: sulfite reductase, ferredoxin dependent 57 629 IPR011787 GO:0020037|GO:0050311|GO:0051539
Car06g02071 686 ProSitePatterns Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 539 555 IPR006066 GO:0016491|GO:0020037|GO:0051536
Car06g02071 686 Gene3D Sulfite Reductase Hemoprotein;Domain 2 398 482 - -
Car06g02071 686 Gene3D Sulfite Reductase Hemoprotein;Domain 2 121 193 - -
Car06g02071 686 Gene3D Sulfite Reductase Hemoprotein, domain 1 194 397 IPR045854 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02071 K00392 - gmx:547693 1205.28