Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02062 ATGGGTCAAGCTTTTCGCAAGCTTTTCGATACTTTCTTCGGCAATACCGAGATGCGGGTTGTCATGCTTGGTCTTGATGCTGCTGGAAAAACAACTATATTGTACAAGCTACACATTGGAGAAGTTTTATCTACTGTTCCTACCATTGGTTTCAATGTAGAGAAGGTTCAGTATAAGAATGTTATTTTCACGGTTTGGGATGTTGGGGGGCAAGAGAAATTGAGGGCACTCTGGAGGCATTATTTTAACAACACAGATGGTTTGATATACGTTGTTGATAGTCTGGACCGCGAGAGACTTGGGAAAGCAAAGCAGGAATTTCAGACAATCATAAACGACCCATTTATGCTCAACAGTGTCATCTTGGTGTTTGCCAACAAACAGGACCTGAGAGGAGCGATGACGGCCAGAGAAGTATGTGAAGGATTAGGTCTCTTTGATCTCAAGAATAGAAAATGGCACATTCAAGGCACTTGTGCACTTAAGGGCGATGGCCTTTATGAGGGTTTGGACTGGTTGTCCTCAACACTGAAGGAGATGAAGTCTGCTGGATACTCTTCATTAGGATTAGGAACTTCATCCTTCTAG 588 0.4303 MGQAFRKLFDTFFGNTEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRALWRHYFNNTDGLIYVVDSLDRERLGKAKQEFQTIINDPFMLNSVILVFANKQDLRGAMTAREVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLSSTLKEMKSAGYSSLGLGTSSF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02062 195 PANTHER ADP-RIBOSYLATION FACTOR B1B 1 195 - -
Car06g02062 195 CDD Arf1_5_like 18 176 IPR045872 GO:0003924
Car06g02062 195 Pfam ADP-ribosylation factor family 6 176 IPR006689 GO:0003924|GO:0005525
Car06g02062 195 SMART sar_sub_1 9 177 IPR006689 GO:0003924|GO:0005525
Car06g02062 195 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
Car06g02062 195 PANTHER ADP RIBOSYLATION FACTOR-RELATED 1 195 IPR024156 GO:0005525
Car06g02062 195 Gene3D - 3 186 IPR027417 -
Car06g02062 195 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Car06g02062 195 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Car06g02062 195 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Car06g02062 195 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Car06g02062 195 TIGRFAM small_GTP: small GTP-binding protein domain 16 135 IPR005225 GO:0005525
Car06g02062 195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 181 IPR027417 -
Car06g02062 195 SMART arf_sub_2 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02062 Car-Chr6 20541973 20545823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02062 K07937 - gmx:100499903 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02062 06 20541973 20545823 Car06g02062 06 20541973 20545823 ECH