Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02058 ATGGCGTCCGATCCTGAGCAGCAACCGCCACTTTCCTCTTTCTCAAAGGAAGGAAAGTCATCCAGGGAGGATAGAAGTGCAAGGGAGCCCCTACTTAATGGGGTTCGTGGCTCTGAAAATTATTCCATCTCTGCTGCAATTCTACCATTTCTCTTCCCAGCTTTTGGTGGTCTACTATTTGGCTATGATATCGGTGCCACATCTAGTGCAACAATTTCCATTCAGTCACCATCACAAAGTGGAATAACTTGGTATGATTTAGGCTCTGTTGAAATTGGACTTCTTACTAGTGGATCATTATATGGTGCCTTAATAGGCTCTTTGTTGGCCTTCAATATTGCCGACTTCCTAGGGAGAAGAAGAGAGCTGATTGTAGCTTCACTTTTGTATCTTGTTGGAGCCCTCATAACAGCATTAGCTCCTAATTATCCTATATTGGTGGTTGGGAGATTGGTATTTGGCATAGGAATTGGACTGGCAATGCATGCTGCTCCTATGTACATTGCGGAGACAGCTCCAACGCCAATACGTGGGCAACTAATCTCTCTGAAAGAGTTCTTTATAGTAATTGGGATTGTTGCAGGGTATGGACTAGGCAGTTTGCTTGTAGATACTGTTTCTGGATGGCGGTATATGTATGGAATTAGTAGTCCTGTTGCAGTAATAATGGGATTTGGAATGTGGTGGCTCCCAGCTTCTCCTAGATGGCTACTTTTACGTGCTATACAGAGAAAAGGGGATATTCAGAATTTGAAAGACACGGCAATCCGTAGTTTGTGCCAACTTCAAGGTCCGGCGTTTCATGATTCTGCTCCTCAGCATGTTGATGAGATTCTGGCAGAGCTTTCTTATATTGGTGAAGAAAATGATGTTACCTTTTTAGAAATGTTTCGTGGAAAATGCCGGAAGGCCCTTGTGATAAGTGCAGGATTGGTCTTGTTTCAACAGATCACAGGGCAACCAAGTGTTCTCTACTATGCCGCATCAATCCTTCAGAGTGCAGGATTCTCCTTAGCATCTGATGCTACCCGGGTCTCTATTCTCCTTGGTGTATTTAAGTTGATTATGACTGGAGTGGCTGTTGTCGTTGTTGATAGAATCGGAAGGAGACCTTTACTACTTGGAGGCGTTTCAGGAATAGTGATCTCCTTATTCTTATTGGGTTCATATTACATATTCTTGGATAATGCAGCAGTTCTTGCTGTAGTTGGCCTGCTTCTCTATGTTGGTTGTTATCAGATTTCCTTTGGTCCAATGGGTTGGCTTATGATAGCAGAGATTTTTCCATTGCGCCTTAGAGGTCGAGGACTTAGTATAGCGGTTCTCGTCAATTTTACGGCAAATGCCCTGGTTACATTTGCCTTTTCCCCACTGAAGGATTTACTGGGAGCAGGAATTTTGTTTTACATATTTTGTGCAATAGCAGTGGCATCTCTTGTATTCATATACTTCATTGTACCAGAAACCAAGGGGCTTACACTAGAGGAAATTGAGGCAAAATGCCTGTAA 1509 0.4301 MASDPEQQPPLSSFSKEGKSSREDRSAREPLLNGVRGSENYSISAAILPFLFPAFGGLLFGYDIGATSSATISIQSPSQSGITWYDLGSVEIGLLTSGSLYGALIGSLLAFNIADFLGRRRELIVASLLYLVGALITALAPNYPILVVGRLVFGIGIGLAMHAAPMYIAETAPTPIRGQLISLKEFFIVIGIVAGYGLGSLLVDTVSGWRYMYGISSPVAVIMGFGMWWLPASPRWLLLRAIQRKGDIQNLKDTAIRSLCQLQGPAFHDSAPQHVDEILAELSYIGEENDVTFLEMFRGKCRKALVISAGLVLFQQITGQPSVLYYAASILQSAGFSLASDATRVSILLGVFKLIMTGVAVVVVDRIGRRPLLLGGVSGIVISLFLLGSYYIFLDNAAVLAVVGLLLYVGCYQISFGPMGWLMIAEIFPLRLRGRGLSIAVLVNFTANALVTFAFSPLKDLLGAGILFYIFCAIAVASLVFIYFIVPETKGLTLEEIEAKCL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02058 502 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 1 15 502 - -
Car06g02058 502 TIGRFAM SP: MFS transporter, sugar porter (SP) family 42 497 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g02058 502 MobiDBLite consensus disorder prediction 1 16 - -
Car06g02058 502 SUPERFAMILY MFS general substrate transporter 50 498 IPR036259 -
Car06g02058 502 Gene3D MFS general substrate transporter like domains 40 500 IPR036259 -
Car06g02058 502 ProSiteProfiles Major facilitator superfamily (MFS) profile. 49 490 IPR020846 GO:0022857
Car06g02058 502 ProSitePatterns Sugar transport proteins signature 1. 360 376 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car06g02058 502 PRINTS Sugar transporter signature 57 67 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g02058 502 PRINTS Sugar transporter signature 147 166 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g02058 502 PRINTS Sugar transporter signature 315 325 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g02058 502 PRINTS Sugar transporter signature 402 423 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g02058 502 PRINTS Sugar transporter signature 425 437 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g02058 502 MobiDBLite consensus disorder prediction 1 31 - -
Car06g02058 502 ProSitePatterns Sugar transport proteins signature 2. 152 177 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car06g02058 502 CDD MFS_GLUT10_12_Class3_like 52 497 - -
Car06g02058 502 ProSitePatterns Sugar transport proteins signature 1. 110 127 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car06g02058 502 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 15 502 - -
Car06g02058 502 Pfam Sugar (and other) transporter 52 499 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02058 Car-Chr6 20498524 20505254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02058 1 502 Organic Solute Cotransporters AT5G17010 73.956 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02058 - - lja:Lj3g3v3639770.1 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02058 06 20498524 20505254 Car06g02058 06 20498524 20505254 ECH