Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02048 ATGAGTGACAATTTGAAGGAAAAAGTCAATGCCATCGGAGAGCGTCTCAAAATCGGTGGAGTTGAGATGGGTCGAAAGGTGACTGCTAGCATGACTACTATGAGCTTCAAAGTCAAAGAATTTTTCCAAGACCCAAACCAAGCTGATAAACTCGTTTTTGATGCTACTTCTGAGTCTCTTCATGAGCCTAACTGGCCCATCATTCTCCATATTTGTGACTTGGTCAATGATGAAAAACTCTACACTTGTGATGTTGTGCGTGCTATAAAGAAAAGGATGGTGACAAAAAGTCACAGAGGTCAGTACTTGGGTTTGGTTTTGCTTGAAGCATTGGTGAAGAATTGTGACAAGGGTTTCTTTGAGGTGGTAACCGAGAGAGTACTTGATGAAATGGTTAAGCTTGTTGAAGATCCTCAGAGTTTTGTTACTTGCAGGGATAAGGCTTTGATCATGATTCGGGAATGGGGAGAGTCAAACAATGAGCTTCGCTATTTGCCTCTTTATGAAGAAACTTACAAGAGTTTGAAATTGAGGGGTATTCGATTCCCTAGTCATCCAAATGAAAGTTTGCCTCCTATTTTAACTTCTCGCTCTGCCTCTGCATCAGAGTATGATCTTATTCCTGTACATCTAAGTCAACATCAAAACCCTATGTCAAGTTTCACATCTCAACAAATAAAGCAAGCTTTCGATGTTGCAAGAAATAGCTCTGAGCTTCTCTCGTCTGTCTTATCTTCTTCAGTGCATCAAGGTGTTCTCAAGCAAGATTTGACCATCGCATTAGTACAACAATGTCGTCAGTCCCAATCTACTATCCATAGAATCATTGAAACTGTTGGGGATAATGAAGCAATGCTTTTTGAGGCCTTGCAAGTAAATGATGAGATTCAGAATATTCTCTCTAAATATGAAGAGTTGAAGAAGCCTAAAGTTTCTCCACTTGAACCAAAACAGAATATGATACATGTTGCTATTGAGGCAGAAGAGTCACCCTTGATTAGAAAGCCAAGTTGTTCAAAAGTTGGAGTCCAAGGATTGAGCCatgatgacatgatggatgatcttgatgagatgatTTTTGGCAAAAAGGGTGGGGATGCATCTGAATGGAGACAAGATCCAAAGAATCAAAACCAACAATCATCAAAATATGACTTTATCTCCTTATAA 1170 0.3846 MSDNLKEKVNAIGERLKIGGVEMGRKVTASMTTMSFKVKEFFQDPNQADKLVFDATSESLHEPNWPIILHICDLVNDEKLYTCDVVRAIKKRMVTKSHRGQYLGLVLLEALVKNCDKGFFEVVTERVLDEMVKLVEDPQSFVTCRDKALIMIREWGESNNELRYLPLYEETYKSLKLRGIRFPSHPNESLPPILTSRSASASEYDLIPVHLSQHQNPMSSFTSQQIKQAFDVARNSSELLSSVLSSSVHQGVLKQDLTIALVQQCRQSQSTIHRIIETVGDNEAMLFEALQVNDEIQNILSKYEELKKPKVSPLEPKQNMIHVAIEAEESPLIRKPSCSKVGVQGLSHDDMMDDLDEMIFGKKGGDASEWRQDPKNQNQQSSKYDFISL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02048 389 Gene3D - 206 310 IPR038425 -
Car06g02048 389 Gene3D - 40 198 IPR008942 -
Car06g02048 389 SUPERFAMILY ENTH/VHS domain 44 183 IPR008942 -
Car06g02048 389 Pfam GAT domain 234 308 IPR004152 GO:0035091|GO:0043130
Car06g02048 389 CDD VHS 48 176 - -
Car06g02048 389 Pfam VHS domain 48 179 IPR002014 GO:0035091|GO:0043130
Car06g02048 389 ProSiteProfiles VHS domain profile. 55 183 IPR002014 GO:0035091|GO:0043130
Car06g02048 389 PANTHER TOM1-LIKE PROTEIN 1 1 388 - -
Car06g02048 389 SUPERFAMILY GAT-like domain 182 309 - -
Car06g02048 389 PANTHER TOM1-LIKE PROTEIN 1 1 388 IPR044836 GO:0035091|GO:0043130|GO:0043328
Car06g02048 389 MobiDBLite consensus disorder prediction 371 389 - -
Car06g02048 389 ProSiteProfiles GAT domain profile. 221 308 IPR004152 GO:0035091|GO:0043130
Car06g02048 389 MobiDBLite consensus disorder prediction 363 389 - -
Car06g02048 389 SMART VHS_2 48 179 IPR002014 GO:0035091|GO:0043130
Car06g02048 389 PIRSF TOM1 333 386 IPR014645 -
Car06g02048 389 PIRSF TOM1 32 348 IPR014645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02048 Car-Chr6 20427034 20428898 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02048 - - rcu:8280469 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02048 06 20427034 20428898 Car06g02048 06 20427034 20428898 ECH