Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02027 ATGGGGGCTGGAAATGGTTTATTTTATCCATTATTTGCTTTTGCAACGGTGGTGTTTTTCATTTATACGTCATTTGGGGATGTAAGGTTTGGTTTTGAGGAAGAAATTGAATTGGGTTTTGTGGAGAGAAAAGGGTCTCAATTTGTGTTGGATGGAAAAGCTTTTTATATTAATGGGTGGAATTCTTATTGGTTAATGGTTCAATCAGTGGATGCTTATACAAGGCCTAGGGTACGTGAAATGTTCAAAGCTGGGGCTAAAATGGGTCTCACTGTTTGTAGAACTTGGGCATTTAATGATGGTGACTATAATGCCCTTCAAACTTCCCCTGGTGTATTCAATGAAGAAGCTTTCAAGGCCTTGGACTATGTCATAGCCGAAGCAAGGAGACATCGAATTAGGCTGCTTCTCAGCTTAGTAAATAACTTGCGTGCATATGGTGGGAAGGATCAGTATGTCAAATGGGCATGGCAAGAAGGGGTAGGGTTAAGCTCATCTAATGATTCTTTCTTCTATGATCCATCAATTCGAAGTTATTTCAAAAGTTATGTCAAGACTATTCTGACAAGGAAGAATACTATCACTGGAATTGAATATAGGCATGACCCTATCATTTTTGGTTGGGAATTGATTAACGAACCTCGGTGTGTAACCGATCCTTCTGGTGACACTCTCCAAGATTGGATAGAGGAGATGTCAACTTTTGTCAAATCGATCGACAAGAAACATTTGGTGACTGTTGGGCTTGAAGGTTTTTACGGTCCTAATGACCCGAAAAGGTTGACTGCCAATCCACCAGAGGAGTGGGCATCCAAACTTGGATCTGATTTCATTAGGAACTCACAAACCTCAAATATTGACTTCACCTCTGTCCATATTTACGCTGACCATTGGTTTCATAAGCAAGTTTTTGAAGACTATATGAAATTTGTCTCCAAGTGGATGCATTCTCACATTGAAGATGGAGATAATGTATTGAACAAACCTGTATTGTTCTCTGAATATGGATTATCAGACACAGTCAAGAACTTTTCATTGTCTAACCGAGAAACGATGTACAAAACAATTTTAGACATATCCTTCAATTCTGCTAAGAAAAACCGGTCTGGAGCAGGCGCTTTGGTTTGGCAGTTCTTAGTTGGCGGAATGTCCGAGTTAATCGATGATTTCGGGATGGTTCCATGGGAAAGGTCATCAACCTATTCGCTATTTATTAAACATTCATGCAGATTAACCAAGGTCAACAAGGGATTGACTCAACAGAACCCAAGTTTCAAACAATTGTGCTAG 1290 0.3969 MGAGNGLFYPLFAFATVVFFIYTSFGDVRFGFEEEIELGFVERKGSQFVLDGKAFYINGWNSYWLMVQSVDAYTRPRVREMFKAGAKMGLTVCRTWAFNDGDYNALQTSPGVFNEEAFKALDYVIAEARRHRIRLLLSLVNNLRAYGGKDQYVKWAWQEGVGLSSSNDSFFYDPSIRSYFKSYVKTILTRKNTITGIEYRHDPIIFGWELINEPRCVTDPSGDTLQDWIEEMSTFVKSIDKKHLVTVGLEGFYGPNDPKRLTANPPEEWASKLGSDFIRNSQTSNIDFTSVHIYADHWFHKQVFEDYMKFVSKWMHSHIEDGDNVLNKPVLFSEYGLSDTVKNFSLSNRETMYKTILDISFNSAKKNRSGAGALVWQFLVGGMSELIDDFGMVPWERSSTYSLFIKHSCRLTKVNKGLTQQNPSFKQLC 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02027 429 Pfam Cellulase (glycosyl hydrolase family 5) 77 377 IPR001547 GO:0004553|GO:0071704
Car06g02027 429 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 4 429 - -
Car06g02027 429 SUPERFAMILY (Trans)glycosidases 39 403 IPR017853 -
Car06g02027 429 PANTHER - 4 429 IPR045053 GO:0004553
Car06g02027 429 Gene3D Glycosidases 37 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02027 Car-Chr6 20245471 20249973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02027 3 414 Glycoside Hydrolase AT2G20680 67.233 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02027 K19355 - gmx:100806003 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02027 06 20245471 20249973 Car06g02027 06 20245471 20249973 ECH