Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01922 ATGAGAAGTAAGTGTCATCCATTGTTAAGGGGTGTGAGAGAAAATAGCAAATACAAACATGGGTTTTCAGTGGCTGAGATGGAGTCACTCACAAGCATATGTGAGGTTGTTCTACCTTCATTGCCAGTGGATGCTATGAACCAAAGAAAAGATGACCAACATGATGATGATGATGAATCAAGAAAGCATGTCCAATCTTTCTTGAACCTCTCTGCTTCTCAGTATCCAATCCCTCATGAGGTAGCTGAGGCGTTAGTTAAGAGGGGTTTAATAGAAGCAGTAATGTTGATTAGAGTGGTTCTCTGGCTTCTGGCAACGAGGTTGGGTACTTTGTTGCTTTGTGGTTTTCTCTGTCTTAGTAAGGAATGGCCCTTTGTCAACAAATTCTCAAGCATGTCTTTGGATAAAAGAGAAAAGATTGTGCAGAGGTGGCTCAAGCATAGGTTCCTCACTCCTATTAGAGTCGCTTTTGGTTACATCAAAGTCCTATGCCACTTTGTTTTCTTCTCTTGGGTTGATGAAAATGGTGACAACCCAACATGGAAAGCCATTGGATATGAGGTTTCACCTAATGAGAAAATGACCAATGTCTCCAAAGAGAGTGAAGAGAGACCCCTTGAAAAGGGTATTATAGAAACCATGCATGAACATGACTCAACTCTTCAAAAATCTCTATCTGACAAAGGCCTAAATGTTATAGTTGACTCCAAAAACAACATCCTCAAAATCAAATGTGATGCAGTAGTTGTTGGTTCTGGTAGTGGTGGAGGTGTTGCAGCTTCTGTCCTTTCAAATGCTGGATACAAAGTAATTGTTCTAGAGAAAGGAAACTACTTTGTTCCAAAGGATTATTCATCACTAGAAGGTCCTTCAATGAACCAACAATATGAATGTGGAGGGATGTTAGTTTCTGCAGACTCAAGAATACTTGTTTTGGCAGGTTCAACCGTTGGTGGTGGCTCAGCTATTAATTGGTCAGCGTGCCTAAAAACACCACAAGAAGTGATTAAAGAATGGTCAGAAAAACACAAACTTTCAATGTTTTCAAGCTTAGAGTATCTTTCTGCTATGGAAACTGTGTGTGAaagaattggtgtcaatcaaaattgcacacaagaaggtgagaaacttgggacacaagttacatggcttgttgatgctgttgaaaaaggcgcagTAATAATAACAGGTTGCAAAGCTGAAAAATTCTTGTTTCAAACCAACAACAATACAAGAAAGAAGAAATCATGCTTAGGAGTTTTAGCAAAGACTTTAAACAATACTAGAGTAACAATGAAGCTACAAATTGAAGCCAAAGTAACAGTTTCTTCATGTGGAGCACTTTTAACACCCCCATTAATGATCACTAGTGGTTTAAAGAACAAAAACATTGGTAGAAACCTTCATCTCCATCCTGTTTTAATGACATGGGGTTACTTTCCAGAATCAAAAAATTTAGATCTCAAAGGTAAAGTCTATGAAGGAGGGATAATAACATCTGTTCATAAATTACTATCATCAAATGATTCAAATTCATATACAAGAGCTATAATTGAAACACCTTTAATAGGACCAGCATCTTTTGCTTCAATGTGTCCTTGGGAATCAGGACTTGATTTCAAACAAAGAATGTTAAACTATTCAAGAACATCACATTTTATAACAATAATAAGAGACAGTTCATGTGGAAAAGTAACAAGTGAAGGAAGAATAAGTTACAAATTGAATGAAATTGACAAAGAGAATATAAGAAGTGGTTTACAACAAGCATTGAGGATTTTAATAGCTGCAGGAGCAGATGAAGTAGGAACACATAGAAGTGATGGACAGAGAATTAAGTGTAGTGAGAAAAGTGAAATTGAAATTGAAGAGTTTATTGAAAGTGTTTGTCCAATGGAAGGAGCATTGTTACCTGGTAATGAGAAATGGAATATATATACTTCTGCTCATCAAATGGGGAGTTGTAGAATGGGAGTGAATGAAAAGGAAGGTGGTGTTGATGAAAATGGTGAGAGTTGGGAAGCTGAAGGTTTGTTTGTTTGTGATGCAAGTGTGCTTCCTACTGCTGTTGGTGTTAATCCTATGATTACTGTTCAATCAACTGCTTATTGTATCTCAAATAGAATTGTTGATTATCTTAGAAAAAGTCCAGTAACTAAGGTTAGTTGA 2169 0.3532 MRSKCHPLLRGVRENSKYKHGFSVAEMESLTSICEVVLPSLPVDAMNQRKDDQHDDDDESRKHVQSFLNLSASQYPIPHEVAEALVKRGLIEAVMLIRVVLWLLATRLGTLLLCGFLCLSKEWPFVNKFSSMSLDKREKIVQRWLKHRFLTPIRVAFGYIKVLCHFVFFSWVDENGDNPTWKAIGYEVSPNEKMTNVSKESEERPLEKGIIETMHEHDSTLQKSLSDKGLNVIVDSKNNILKIKCDAVVVGSGSGGGVAASVLSNAGYKVIVLEKGNYFVPKDYSSLEGPSMNQQYECGGMLVSADSRILVLAGSTVGGGSAINWSACLKTPQEVIKEWSEKHKLSMFSSLEYLSAMETVCERIGVNQNCTQEGEKLGTQVTWLVDAVEKGAVIITGCKAEKFLFQTNNNTRKKKSCLGVLAKTLNNTRVTMKLQIEAKVTVSSCGALLTPPLMITSGLKNKNIGRNLHLHPVLMTWGYFPESKNLDLKGKVYEGGIITSVHKLLSSNDSNSYTRAIIETPLIGPASFASMCPWESGLDFKQRMLNYSRTSHFITIIRDSSCGKVTSEGRISYKLNEIDKENIRSGLQQALRILIAAGADEVGTHRSDGQRIKCSEKSEIEIEEFIESVCPMEGALLPGNEKWNIYTSAHQMGSCRMGVNEKEGGVDENGESWEAEGLFVCDASVLPTAVGVNPMITVQSTAYCISNRIVDYLRKSPVTKVS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01922 722 Gene3D - 641 718 IPR036188 -
Car06g01922 722 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 1 374 - -
Car06g01922 722 PIRSF Lg_Ch_AO 8 374 IPR012400 GO:0046577
Car06g01922 722 PIRSF Lg_Ch_AO 370 718 IPR012400 GO:0046577
Car06g01922 722 Pfam GMC oxidoreductase 369 473 IPR000172 GO:0016614|GO:0050660
Car06g01922 722 Gene3D - 230 505 IPR036188 -
Car06g01922 722 Pfam GMC oxidoreductase 570 704 IPR007867 GO:0016614
Car06g01922 722 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 1 374 - -
Car06g01922 722 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 374 715 - -
Car06g01922 722 SUPERFAMILY FAD/NAD(P)-binding domain 243 715 IPR036188 -
Car06g01922 722 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 374 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01922 Car-Chr6 19186948 19193998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01922 2 714 Acyl Lipid Metabolism Gene Families AT4G28570 51.451 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01922 K17756 - gmx:100799413 1060.83