Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01904 ATGACATTCTTAAGTATAGAAATTAAAAAAAAAATTGCAGGTTGCCTAGGAATAAAACTGAGGCCAAAGATTTTGGGAAGAAAGCTTGAATCAACTGTCCCAGAAGAGATATATGGAATATTAGATCAACCCATTGGAAAAGATGAATTGGAGAGAAGATCTGATATTCCTCAGACTTTAGAAGAGTTCATGACTGAAATGAAGAAAGGCGGATATGATGCCAGAACATTCGCGATTAAACTACGAGAAATGGTAACATTTATGGAACAAAGGACTAGGATGGCCAAAATCCAAGAATATTTATATCGTCATGTAGCATCAAGCAGCATACCTAAACAGCTTCATTGCCTTGACTTGAGGCTAGCGAATGAACACACCAACAATGCAGAAGCGCGCCTTCAGCTACCGTCTGCAGAACTTGTTCCTGCTCTTGTTGACAATTCTTACTTCCACTATGTTCTTGCCTCAGACAATGTGCTTGCAGCCTCTGTGGTAGCAAAATCACTTGTTCACAACAGTTTGCAGCCTGAGAGAGTTGTTCTACACATAATTACAGATAGAAAGACTTATTATCCAATGCAAGCTTGGTTTTCATTGCATACATTATCACCTGCTATAATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTACAAAGAGAAAAGTGCCTGTTCTGGAGGCAATGGAAAAAGATCAAAATGTGCGGTCGCGGTTTAGAGGAGGTTCATCAGCTATAGTTGCAAATACTATTGAGAAGCCGAAATTTATTGCAGCAAAACTGCAGGCACTTAGTCCCAAGTATAATTCAGTGATGAATCACATTCGAATACATCTTCCAGAGATGTTCCCCAGTCTTGACAAGGTGGTATTCCTCGACGACGACATTGTGGTACAAACTGATCTTTCACCTCTATGGGACATTGACATGAATGGAAAAGTCAATGGAGCAGTAGAAACATGCACTGGACAAGATAAATTTGTGATGTCAAAGAGGTTGAATAACTATTTGAACTTCTCCCACCCTCTAATATCCAAAAAATTTGATCCAAATGAATGTGCTTGGGCTTATGGCATGAACATTTTTGATCTGGAGGCTTGGAGGAAGACTAATATAAGCTATACATACCATTATTGGGTTGAACAGAATACAAAATCAGACTTGAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTAATAGCATTCCATGGTAATGTTCATACTATTGATCCTTTCTGGCACATGATGGGATTGGGATATCAGGAAAATACAAGTTTTGATGATGCTAAGAATGCTGGTGTTGTCCATTTCAATGGCAGGGCAAAGCCATGGCTAGATATAGCTTTTCGACAATTAAGGCCATTGTGGACCAAGTATGTTGACTTTTCAGATAACTTCATCAAGGGATGTCACATTAGGAGATCTTAA 1431 0.3927 MTFLSIEIKKKIAGCLGIKLRPKILGRKLESTVPEEIYGILDQPIGKDELERRSDIPQTLEEFMTEMKKGGYDARTFAIKLREMVTFMEQRTRMAKIQEYLYRHVASSSIPKQLHCLDLRLANEHTNNAEARLQLPSAELVPALVDNSYFHYVLASDNVLAASVVAKSLVHNSLQPERVVLHIITDRKTYYPMQAWFSLHTLSPAIIEVKALHHFDWFTKRKVPVLEAMEKDQNVRSRFRGGSSAIVANTIEKPKFIAAKLQALSPKYNSVMNHIRIHLPEMFPSLDKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCTGQDKFVMSKRLNNYLNFSHPLISKKFDPNECAWAYGMNIFDLEAWRKTNISYTYHYWVEQNTKSDLSLWQLGTLPPGLIAFHGNVHTIDPFWHMMGLGYQENTSFDDAKNAGVVHFNGRAKPWLDIAFRQLRPLWTKYVDFSDNFIKGCHIRRS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01904 476 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 152 467 IPR029044 -
Car06g01904 476 Pfam Glycosyl transferase family 8 153 449 IPR002495 GO:0016757
Car06g01904 476 SUPERFAMILY Nucleotide-diphospho-sugar transferases 151 473 IPR029044 -
Car06g01904 476 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 474 IPR029993 GO:0047262
Car06g01904 476 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 474 - -
Car06g01904 476 CDD GT8_like_1 150 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01904 Car-Chr6 18976902 18980218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01904 14 476 Glycosyltransferase AT5G54690 76.940 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01904 K20867 - gmx:100783157 834.328