Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01891 ATGAATGTTAGTGTTACTAATACTATCACTCTTTTCCTCATAACCCAACTCCTTGTAAGGACAGAGTCAATTAACAGAGGAGATTTTCCACATGGGTTTGTATTTGGAACTGCTTCTTCAGCTTACCAGTTTGAGGGAGGTGTTGATGAAGGAAATAAAGGAGATAGCATATGGGACACTTTCTCAAGGATACCAGGGAGAATTTTGGACTTCAGTAATGCAGATATGGCAGTGGATCAATATCACCGATTTCAGAATGACATAAACTTGATGAAGGATTTAGGAATGGATTCTTACAGATTTTCCATATCATGGCCTAGAATTTTCCCAAATGGAACAGGGGAACCAAATAGAGAGGGAATAAAATATTACAACAACCTCATTGACGCTTTATTAGAAAAAGGAATCCAGCCTTTTGTAACTCTATATCATTGGGATCTTCCACAGATGCTAGAAGATAAATATGAAGGATGGTTAAGCCCACAAATAATAAATGATTTTGAGCATTATGCCTATACATGCTTCAAAGCTTTTGGAGACAGAGTTAAGCATTGGATTACCTTCAATGAACCTCATAACTTTGCCATCCATGGTTATGATTTAGGCATTCAAGCACCAGGAAGATGTTCCCTTTTGGGTCATCTTGTATGTAAGAAGGGAAAATCATCTACTGAACCATACATTGTTGCTCATAACATTCTCTTATCTCATGCTGCTGCTTATAGAAGTTACCAACTACATTTCAAGGAAAAACAAAGAGGTAAAATAGGGATAGCACTAGATGCTGTTTGGTATGAACCAATAACTGAACTAGATGAAGACAAAGAAGCAGCAGCTAGAGCCATGGACTTTTCACTTGGATGGTTCCTTGAGCCTCTTTTCTTTGGAAAATATCCTCTCTCAATGCAAACTCTTGTAGCTGAGAGATTGCCAGAGATTACTGATGCAACCTCAAACTTTCTTGTGGGATCCTTGGATTTTATCGGCATTAACCACTATACCTCGGTGTATACTCGAAACGACAGAACTCGGATTCATAAACTGATTATGCGAGATGGTATAGCTGATGCTGCTGTTATTACAACTGCATACAGAAAAGGAGCTGCAATTGGAGAAAGGGCAGCTTCAAGTTGGTTACATATTGTCCCATGGGGAATCAGAAAATTGATGAAACATGTGAAAGTCAAATATGGGAACACACCAATAATTATAACCGAAAATGGAATGGATGATCCAAGCAGACCCTTTATGACCTTACAAAAGGCATTAAAGGATGACAAAAGGATAAGATACCATAGGGACTATCTCTCAAACCTATCAGCTGCTATAAGGGAAGATGATTGCAATGTGAGGGGTTACTTTGTATGGTCATTGCTTGACAATTGGGAGTGGAACTTGGGATATACAGTACGGTTTGGACTCTACTATGTGGATTTTAAAAACAACCTTACTAGGATACCAAAAGCTTCTGTGCAATGGTTCAAAAATATGCTCACATTGGAAACTCAAAAAATTAGTGAAATTTGA 1527 0.3811 MNVSVTNTITLFLITQLLVRTESINRGDFPHGFVFGTASSAYQFEGGVDEGNKGDSIWDTFSRIPGRILDFSNADMAVDQYHRFQNDINLMKDLGMDSYRFSISWPRIFPNGTGEPNREGIKYYNNLIDALLEKGIQPFVTLYHWDLPQMLEDKYEGWLSPQIINDFEHYAYTCFKAFGDRVKHWITFNEPHNFAIHGYDLGIQAPGRCSLLGHLVCKKGKSSTEPYIVAHNILLSHAAAYRSYQLHFKEKQRGKIGIALDAVWYEPITELDEDKEAAARAMDFSLGWFLEPLFFGKYPLSMQTLVAERLPEITDATSNFLVGSLDFIGINHYTSVYTRNDRTRIHKLIMRDGIADAAVITTAYRKGAAIGERAASSWLHIVPWGIRKLMKHVKVKYGNTPIIITENGMDDPSRPFMTLQKALKDDKRIRYHRDYLSNLSAAIREDDCNVRGYFVWSLLDNWEWNLGYTVRFGLYYVDFKNNLTRIPKASVQWFKNMLTLETQKISEI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01891 508 PANTHER GLYCOSYL HYDROLASE 14 499 IPR001360 GO:0004553|GO:0005975
Car06g01891 508 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 33 47 IPR033132 -
Car06g01891 508 Pfam Glycosyl hydrolase family 1 27 499 IPR001360 GO:0004553|GO:0005975
Car06g01891 508 SUPERFAMILY (Trans)glycosidases 16 498 IPR017853 -
Car06g01891 508 PANTHER BETA-GLUCOSIDASE 41-RELATED 14 499 - -
Car06g01891 508 PRINTS Glycosyl hydrolase family 1 signature 324 338 IPR001360 GO:0004553|GO:0005975
Car06g01891 508 PRINTS Glycosyl hydrolase family 1 signature 402 410 IPR001360 GO:0004553|GO:0005975
Car06g01891 508 PRINTS Glycosyl hydrolase family 1 signature 425 436 IPR001360 GO:0004553|GO:0005975
Car06g01891 508 PRINTS Glycosyl hydrolase family 1 signature 447 464 IPR001360 GO:0004553|GO:0005975
Car06g01891 508 PRINTS Glycosyl hydrolase family 1 signature 471 483 IPR001360 GO:0004553|GO:0005975
Car06g01891 508 Gene3D Glycosidases 15 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01891 Car-Chr6 18878251 18882471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01891 19 444 Glycoside Hydrolase AT5G54570 72.834 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01891 K01188 - gmx:100783543 922.924