Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01888 ATGGCATTCTTCAACACTCCATCCTCCACAGTCATTTTAtccctctctctcctctttctctttctctctcccacattttctctctcctctTCCACCACCATTCATGACCTTCTTCGCTCAAAAGGGTTACCAGCTGGTCTGTTACCAGAAGAAGTAAAGTCATACACTTTCTCAGAAAATGGTCACTTAGAAGTGTTCCTTGAATCACCTTGTTTAACAAAGTACGAAAACAGAGTATACTTTGAACAAGTTGTCACTGCTAATCTCACCTATGGAAGCCTCATTGGTGTTGAAGGGTTACAACAAGAAGAGCTTTTTGTTTGGTTACCTGTTAAAGATATCATTGTTGATGATCCATCTTCAGGCTTGATTCTCTTTGACATTGGTCTTGCTTATAAGCAACTTTCTTTCTCTCTTTTTGAAGTTCCACCTCATTGTAAGCCTCAAGGTGTGATGAAGAATCATGTGAGGAAGGAGAAAGGATTTGAGGCAGTGAGATAG 501 0.3553 MAFFNTPSSTVILSLSLLFLFLSPTFSLSSSTTIHDLLRSKGLPAGLLPEEVKSYTFSENGHLEVFLESPCLTKYENRVYFEQVVTANLTYGSLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAYKQLSFSLFEVPPHCKPQGVMKNHVRKEKGFEAVR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01888 166 PANTHER T31J12.3 PROTEIN-RELATED 11 165 IPR007493 -
Car06g01888 166 Gene3D - 22 150 IPR036758 -
Car06g01888 166 PANTHER - 11 165 - -
Car06g01888 166 Pfam Protein of unknown function, DUF538 35 141 IPR007493 -
Car06g01888 166 SUPERFAMILY At5g01610-like 11 149 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01888 Car-Chr6 18860546 18862409 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01888 - - mtr:MTR_4g081560 273.863