Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01751 ATGGAGATCGATCACGAGCCACCGCCTTCCCTCGACGGTAGCCCCCTCGCCACCGACACCCCCTCCTCTTCTTCCGCTTCGTCTCCACGCGGTTCCAAAGGAAAGGAGATCGAACCTACCGCATCGACGGCGCCGCCTCCTGCAAAGTACGATGATGACGACGAAGAGGAAGAGGATGTTTGCCGTATATGCCGGAACCCTGGCGACGCCGATAATCCTCTCCGGTATCCATGCGCGTGTAGCGGTAGCATCAAATTTGTTCATCAAGATTGTCTTCTTCAGTGGCTTAATCATAGCAACGCTCGCCAATGCGAGGTCTGCAAGCATCCATTTTCCTTCTCTCCTGTTTATGCAGAGAATGCCCCTGCTAGGTTGCCTTTTCAAGAATTTGTAGTCGGAATGGCGATGAAAGCTTGCCATGTTCTGCAATTCTTTTTGCGTCTGAGTTTTGTATTATCTGTGTGGCTCTTAATTATACCTTTCATAACATTCTGGATATGGAGGTTAGCCTTTGTGAGGAGTTTGGGTGAAGCCCAGAGGCTATTCTTAAGCCATTTATCAACAGCAGTTATTCTGACTGATTGCCTCCATGGTTTCCTACTTTCTGCAAGCATTGTCTTCATTTTTCTTGGGGCCACTTCTTTGAGAGATTACTTTAGACATTTGCGAGAAATTGGGGGACAGGATGCTGATAGAGATGATGAAGTGGACAGAAATGGCGCTCGAATTGCTAGAAGACCTCCTGGACAAGCTAatcgtaatgttaatggtgatgggaatggagaagatgctggtgGAGCACAAGGAGTTGCAGGGGCAGGTCAAGTTATTAGGCGAAATGCTGAAAATGTTGCTGCTCGGTGGGAGATGCAAGCAGCACGTCTTGAGGCTCATGTTGAACAGATGTTTGATGGTCTGGATGATGCTGATGGAGCAGAGGATGTGCCCTTTGATGAACTTGTTGGCATGCAGGGTCCAGTTTTTCATTTGGTTGAAAATGCATTTACCGTGCTGGCTAGCAATATGATTTTTCTTGGGGTTGTAATCTTTGTGCCCTTCTCATTGGGTCGCGTCATTCTTCATTACTTATCATGGTTCTTTTCAGCTAGTAGTGCAAATATTACATTAAAAAATGCATTAACGGCTGTTAAAAATTTATCATCTGAAACTCAAGAAAGTGGGTCAATTGGTCAGATTGCAGAAATGCTAAAAGTGAATGCAAGTGAATTGCGTGAAATGTCAAACAACGTAAGCGCATCTGTTTCAGCTGATCTCTTGAAAGGAGGGTCAATTGGAACTTTCAGGATTTCTGATGTTACTACTTTGGCTATTGGATATATTTTCATATTGACTTTAATTTTCTGCTACTTTGGCATTGTTGCGTTAATTCGTTATACAAAGGGTGAACCTTTAACTACAGGAAGATTTTATGGTATTGCTTCTATAGCAGAGACAATTCCATCTCTCTTCAGGCAGTTTTTGGCAGCAATGAGGCATTTGATGACCATGGTAAAGGTTGCTTTTCTATTAGTTATTGAACTAGGGGTATTTCCCCTGATGTGTGGGTGGTGGCTCGATGTATGTACCATACAGATGTTTGGGAAGACAATGGTTCACAGAGTCCAGTTCTTCACTGCATCTCCTTTAGCGAGCTCATTGGTCCATTGGGTTGTAGGGATCGTGTACATGCTACAAATTAGCATATTTGTCAGCCTTCTGAGAGGGGTTTTGCGGAATGGGGTTCTGTACTTCCTTCGGGATCCCGCTGATCCAAACTATAATCCATTCCGTGATCTGATAGATGATCCTGTGCACAAACATGCTCGCAGGGTTTTGTTATCTGTTGCAGTTTATGGGAGTTTGATTGTTATGCTGGTCTTTTTGCCAGTTAAACTTGCAATGCGGATGGCACCTTCTATGTTTCCACTTGAAATATTGCTATCTGATCCCTTCACCGAAATTCCAGCTAACATGCTTCTCTTTCAGATCTGTATACCATTTGCTATTGAGCATTTTAAATTGAGGACAACTATTAAATCCCTACTTCGGTATTGGTTTACGGCAGTTGGTTGGGCACTTGGTTTAACTGATTTCTTACTGCCTAGACCTGATGAAAATGGTAATCAAGAAAATGGTAATGGGGAGCGAGCTAGGCAGGAAAGGTTACAGATTGTGCAAGCAGGGGTACACGATCAGGGTATGGTGCCATTTGCAGGTGATGATTTGAACAGAGTTACTAATGCAGATGCTGGAGAGGATTATGACAATGACGAACAATCTGATTCTGACAGTTATGCCTTTGTGCTTCGCATTGTTCTTTTGCTGGTGATTGCTTGGATGACTCTCCTTGTCTTCAACTCTGCCCTGGTAGTTGTACCAATATCTCTGGGAAGGATACTTTTCAACTCCATTCCTCGTCTTCCTATAACTCATGGCATTAAGTGCAACGATCTGTATGCTTTCATCATCGGAAGTTATGTGATCTGGACTGCTGTTGCTGGAGTTAGATACTCAATCGAGCAAATTAGGAAAAGGAGGACTTCAGTTCTGTTGAACCAAATATGGAAGTGGTGTAGCATTGTTGTTAAGAGTTCTGCACTTTTGTCTATATGGATATTTGTCATCCCAGTGCTAATTGGGCTTCTCTTTGAGCTTTTGGTCATTGTGCCAATGAGAGTTCCCGTGGATGAAAGTCCAGTATTCCTCCTTTATCAAGACTGGGCATTAGGCCTTATATTTCTCAAGATATGGACTAGATTGGTTATGTTGGACCACATGATGCCTCTAGTGGATGAAAGTTGGCGAGTAAAGTTTGAGAGGGTGAGAGAGGATGGTTTCTCCAGGTTGCAAGGCCTGTGGGTCCTACGGGAGATTGTACTTCCAATCATAATGAAACTATTGACAGCATTGTGTGTACCATATGTGTTGGCCAGAGGTATGTTTCCGGTGCTTGGATACCCATTGGTGGTAAATTCTGCTGTCTATCGGTTTGCATGGTTGGGATGCCTCTCTTTCAGTTTCTTGTGCTTTTGTGCCAAGAGATTTCATGTCTGGTTCACAAATCTCCACAATTCAATACGCGACGACCGATATCTTATTGGCCGGAGATGTTGGACTACGGTTGAGGCGCATAAATCAACAGGCGGGCTGAGTGAAAATCATTGTCAGCACATACTAACTCCCAGTCTCCTTGCACCTCCCTCCACGGTCATGACAGAAGCGACCATCTCCCGTTGCCCTTCATCTTCCCCCAATCCCAACTGA 3264 0.436 MEIDHEPPPSLDGSPLATDTPSSSSASSPRGSKGKEIEPTASTAPPPAKYDDDDEEEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYAENAPARLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIWRLAFVRSLGEAQRLFLSHLSTAVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREIGGQDADRDDEVDRNGARIARRPPGQANRNVNGDGNGEDAGGAQGVAGAGQVIRRNAENVAARWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFVPFSLGRVILHYLSWFFSASSANITLKNALTAVKNLSSETQESGSIGQIAEMLKVNASELREMSNNVSASVSADLLKGGSIGTFRISDVTTLAIGYIFILTLIFCYFGIVALIRYTKGEPLTTGRFYGIASIAETIPSLFRQFLAAMRHLMTMVKVAFLLVIELGVFPLMCGWWLDVCTIQMFGKTMVHRVQFFTASPLASSLVHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSMFPLEILLSDPFTEIPANMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVGWALGLTDFLLPRPDENGNQENGNGERARQERLQIVQAGVHDQGMVPFAGDDLNRVTNADAGEDYDNDEQSDSDSYAFVLRIVLLLVIAWMTLLVFNSALVVVPISLGRILFNSIPRLPITHGIKCNDLYAFIIGSYVIWTAVAGVRYSIEQIRKRRTSVLLNQIWKWCSIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRVKFERVREDGFSRLQGLWVLREIVLPIIMKLLTALCVPYVLARGMFPVLGYPLVVNSAVYRFAWLGCLSFSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRCWTTVEAHKSTGGLSENHCQHILTPSLLAPPSTVMTEATISRCPSSSPNPN 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01751 1087 Coils Coil 278 298 - -
Car06g01751 1087 PANTHER SSM4 PROTEIN 49 1030 - -
Car06g01751 1087 MobiDBLite consensus disorder prediction 15 31 - -
Car06g01751 1087 MobiDBLite consensus disorder prediction 1 55 - -
Car06g01751 1087 ProSiteProfiles Zinc finger RING-CH-type profile. 53 114 IPR011016 GO:0008270
Car06g01751 1087 MobiDBLite consensus disorder prediction 230 268 - -
Car06g01751 1087 ProSiteProfiles Zinc finger RING-type profile. 61 108 IPR001841 -
Car06g01751 1087 PANTHER ZINC FINGER, RING-CH-TYPE, ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 49 1030 - -
Car06g01751 1087 Pfam RING-variant domain 61 107 IPR011016 GO:0008270
Car06g01751 1087 CDD RING_CH-C4HC3_MARCH6 60 109 - -
Car06g01751 1087 SUPERFAMILY RING/U-box 55 112 - -
Car06g01751 1087 SMART ringv_2 60 108 IPR011016 GO:0008270
Car06g01751 1087 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 119 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01751 Car-Chr6 17331174 17338000 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01751 K10661 - gmx:100813205 1872.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01751 06 17331174 17338000 Car06g01751 06 17331174 17338000 ECH