Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01735 ATGGCTTCCTCTACTTCCCTTTCTTCTCACCTTCACACACCCATATTCTCTTcttctccttccccttccccttccccttccccttcTCGCCTTAATCCTCTTCCCTCTTTTCCCTTCCATTCTCGAATCACCCACAAACCCCTTCACCTTCAAACCCCTCTTCTTTCCTCCAAGATTCGCTCTTTGCGCCAAGAAACCACAGCCACACCAGTTACTAAAGACCTGTGGGAAAATTCAATTCTGAAAAGTGAAACTCCAGTCCTTGTTGAATTCTACGCGAATTGGTGTGGCCCATGCAGGATGGTACACCGAGTTATTGATGAGATTGCAACAGAGTATGCTGGAAGACTTAAGTGCTTTGTACTCAACACAGACACCGATATGCAAGTTGCTGAAGATTACGAAATTAAGGCTGTACCCGTGGTTTTGCTGTTTAAAAATGGCCTGAAATGTGATGCTATAGTTGGTACAATGCCAAAGGAATTTTATGTTGCTGCAATTGAGAGGATGTTCAAGTCTTGA 522 0.4061 MASSTSLSSHLHTPIFSSSPSPSPSPSPSRLNPLPSFPFHSRITHKPLHLQTPLLSSKIRSLRQETTATPVTKDLWENSILKSETPVLVEFYANWCGPCRMVHRVIDEIATEYAGRLKCFVLNTDTDMQVAEDYEIKAVPVVLLFKNGLKCDAIVGTMPKEFYVAAIERMFKS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01735 173 PANTHER THIOREDOXIN M3, CHLOROPLASTIC 17 172 - -
Car06g01735 173 CDD TRX_family 78 168 - -
Car06g01735 173 PANTHER GEO12009P1 17 172 - -
Car06g01735 173 MobiDBLite consensus disorder prediction 1 18 - -
Car06g01735 173 ProSiteProfiles Thioredoxin domain profile. 28 173 IPR013766 -
Car06g01735 173 MobiDBLite consensus disorder prediction 1 31 - -
Car06g01735 173 PRINTS Thioredoxin family signature 87 95 - -
Car06g01735 173 PRINTS Thioredoxin family signature 95 104 - -
Car06g01735 173 PRINTS Thioredoxin family signature 135 146 - -
Car06g01735 173 Pfam Thioredoxin 70 167 IPR013766 -
Car06g01735 173 ProSitePatterns Thioredoxin family active site. 88 106 IPR017937 -
Car06g01735 173 Gene3D Glutaredoxin 68 173 - -
Car06g01735 173 SUPERFAMILY Thioredoxin-like 64 170 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01735 Car-Chr6 17162596 17164884 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01735 K03671 - gmx:100306680 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01735 06 17162596 17164884 Car06g01735 06 17162596 17164884 ECH