Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01720 ATGGCTATTTCTATCTTTCAGGACAGCCTTGGACGTGTCATCCTTTCTGAATCTGGAACCAGGCAatctccatctccatctccatcaccaccatctttctctttctcctctGTTTTTTCAACAAAAAAACCCTTCCCTAATCGCATGCCTTCAGGTGGGGCAGTGGCTTATGACAATATGAGTCCCTTCGTCTTCCTCCTATGGCTTGTCACTGTCCCTCTCCTTGCCCACCCTGCCCTTTCTAACCCTCTAGGGTATTTTATAAACTGTGGGGGTTCAAATGAGGTAACGGTAGACAGTTTGAAATATGTTCCTGATGGAAGCTACACAAAGGTTGGAAGCGTTGCCACAATCAATCAACCAGACTTGTTGCCAACACTCACCACATTGCGTTACTTCCCCAACACGCAATCTAGAAAGTTTTGCTATTCATTTCCGGTTATCAAAGGCAACAAGTATCTTGTGAAAACCATATACTATTATGGAGGTTTTGATGGAGGGAAGCAACCACCAGTGTTTGATCAAATTGTTGAAGGGACAAGATGGAGTGTTGTTAACACCACAGATGATTATGCTAAAGGTCTTAGTTCATACTATGAGGTTGTGGTTGTGTCTCATGGGAAGAAGTTGAGTGTGTGTTTGGCTAGGAATGAACATACTGGTACCTCAAGTCCTTTCATCTCTGCCTTGGAGGTTAAGAGCTTGGATGGTTCTTTGTATAATCCTACTGATTTTTCCAAATATGCACTTGTAACTGTTTCTAGACATTCTTTTGGAGGTGAAGATATCATTAGTTTTCCAGATGACAAATTTAACCGGATATGGCAACCATTTAAGGACCAAAATCCAGTTGTGGCAAGCCTTTCAAATGTAACTTCTTCAGACTTCTGGAACCTTCCTCCAGTTAAAGCATTCAGTTCAGGAATAACCACTAGTGAAGGGAAGACACTTGAAATTAATTGGCCACCAGTGTCCCTTCCAAGTACCTACTACTACATTTCTCTCTATTTTCAAGACAACAGAAATCCAAGCCCTTTAAGCTGGAGAGTCTTTGATGTTTCTATAAATGGCCACACTTTTTTTTCAACCCTTAATGCCACAACTAAGGGTGTCACAGTTTATGCTGCACAATGGCCACTTTCTGGACAAACCAAAATTACTATGACACCTTCTGGTGAAATGCCTGTTGGACCTGTGCTCAATGCTGGAGAAGTTTATCAGATTCTTCCCCTCGGCGGTCGAACTCAGACAAAAGATTTAATTGCCTTGGAAGATTTGGCTAGAAGCATTCAGAATCCACCTCGGGATTGGAACGGTGATCCTTGCCGGCCTAAAGGACATTCGTGGACTGGAGTTACATGCTCTGAACAATTTATTGCACGAGTCACCTCATTGAATTTAACTAATGGTGGCCTGGCTGGGACACTACCTCCAACTATTGGAAATCTAACTGCTCTTTCTCACCTTTGGCTTGGGGGAAACAAATTCACAGGCAAAATCCCTGAATTAGGTGGACTCAAGGAGTTAGAAACTTTGCATTTGGAGAATAACAAGTTTGAAGGACCACTTCCTCCATCAATACAGAAACTTCCAAAACTGCGTGAGATCTATTCTGATATGCAAAATAACAAGTCTGATGGGAAAGCTACTACCAAACACTAA 1662 0.4097 MAISIFQDSLGRVILSESGTRQSPSPSPSPPSFSFSSVFSTKKPFPNRMPSGGAVAYDNMSPFVFLLWLVTVPLLAHPALSNPLGYFINCGGSNEVTVDSLKYVPDGSYTKVGSVATINQPDLLPTLTTLRYFPNTQSRKFCYSFPVIKGNKYLVKTIYYYGGFDGGKQPPVFDQIVEGTRWSVVNTTDDYAKGLSSYYEVVVVSHGKKLSVCLARNEHTGTSSPFISALEVKSLDGSLYNPTDFSKYALVTVSRHSFGGEDIISFPDDKFNRIWQPFKDQNPVVASLSNVTSSDFWNLPPVKAFSSGITTSEGKTLEINWPPVSLPSTYYYISLYFQDNRNPSPLSWRVFDVSINGHTFFSTLNATTKGVTVYAAQWPLSGQTKITMTPSGEMPVGPVLNAGEVYQILPLGGRTQTKDLIALEDLARSIQNPPRDWNGDPCRPKGHSWTGVTCSEQFIARVTSLNLTNGGLAGTLPPTIGNLTALSHLWLGGNKFTGKIPELGGLKELETLHLENNKFEGPLPPSIQKLPKLREIYSDMQNNKSDGKATTKH 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01720 553 Pfam Malectin-like domain 88 408 IPR024788 -
Car06g01720 553 PANTHER OS07G0107800 PROTEIN-RELATED 62 548 - -
Car06g01720 553 Pfam Leucine Rich Repeat 509 530 IPR001611 GO:0005515
Car06g01720 553 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-KINASE-RELATED 62 548 - -
Car06g01720 553 Gene3D - 82 235 - -
Car06g01720 553 Pfam Leucine rich repeat N-terminal domain 419 455 IPR013210 -
Car06g01720 553 Gene3D Ribonuclease Inhibitor 415 550 IPR032675 -
Car06g01720 553 SUPERFAMILY L domain-like 443 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01720 Car-Chr6 16971040 16974701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01720 101 529 Receptor kinase-like Gene Family AT5G59680 28.894 7.61e-50 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01720 - - cam:101498863 1093.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01720 06 16971040 16974701 Car06g01720 06 16971040 16974701 ECH