Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01683 ATGAAGCCCATCGAGAGTTTCAATGATCTGATCCATGAGGCCAAGCTTCGCACTCTCTGGTGGGCCCTCTCTATTTTTGCCGTTACTTATTTCCTCACCAATACAAGTAAATCGATGTGGATGAATGTACCAATGTCCATTCTATTTGTTTGTGCTCTGCGCATTCTTGTAAATAATGTGGAGTTTCGTTGGAAGGTTAAACGGCCTAGATCAAATACATATCTATCTCATTTGGAGAAAAAGCAGTTGTCTTTGAATGATCCTCGTCTCTCCAGTGCGCCTTCCCAGACAAAGTGGAAGAGGAAAATTGATTCTCCTGTTGTGGAGGATGCAATGGGTGATTTCATTGATAAGATTTTGAAGGATTTCGTGGTTGATTTATGGTACTCGGAAATTACTCCGGATAGGGAGTTCCCCGAGCAGATACGTGCAATAATCATGGATGTTCTTGCTGAAATATCAGCAAGGGTTAAAGATATAAACCTTGTTGACTTGTTGACTAGGGATTTAGTTGATTTAATAGGCGATCACTTGGAACTTTTCAGAAGAAATCAAGCTTTTATAGGTGTCGATGTTATGAAAACATTATCTTCAGAGGAGAGGGATGACAGATTGAAATTCCATTTGTTGAACTCTAAGGAGCTTCATCCAGCACTAATATCTCCTGAGAGTGAGTACAAGGTTCTTCAGAGGCTAATGAGTGCACTTTTAGCTACGGTACTGAAACAAAGAGAAGCGCAGTGTCCCGTGATTCGCTCAATATCTCGGGAGCTTTTGACTTGCTTGGTGATGCAGCCTATTATGAATTTGGCAAGTCCTGGGTTTATAAATGAACTGATTGAATCCCTTCTACTTCTCCTCAACGATGATGGTAAAAAGTGGATGGCTGGTGATCAGTCGACTAATGCAGCAAGTCATCATCACGGTCATTCTGTAGCTACTGGGGGGAGACATGACAATCTCACAGCCTCTAACAAGCATCCATCTTTAAATCAAGGAACCGACATGATATTGGCTAAAATGAGTGACCCGGTAGAGACATCATCACAATATAACGCACTCCATCAAGAATCTTCAGAGGCCAAGCCTGCTGATTGGGCACGAATGTTGGAGGTTGCAACTCAGAGGAGAACTGAAATTCTTATGCCTGAGAATCTCGAGAACATGTGGGCAAAAGGAAGGAATTACAAAAGGAAAGAGAACAAAATTGTCAAAACTGGATTTCAGGATCTTCCAACTAAGAGTCCTGCTACCGACAGTTCACTGCCTTATCAAAAAATGGCCCAGGAAACATTAGCGAGTAAACGTGGAAAGTATGAAGCTGCAGAAGGGAAGTCTTCTCCACCTTCAGATCCGCTACAAAGAGTTGCTATTACAAATAGTTCAGAATCTTCTCATATCCATGACAAGAAATTATCTTTTGAGGGAGAGCTTGGAATTGATAAAGTGAAAGAGGGTACAAAGGGCTCTTCTTCTGAAGGGTATAAAAGTTCACTAAAGAGGTCTAACAGTGCTTCTGCCTTGGGAATCCAACCTAATAAAGAAGGTGGTTCCATTATTTCAGAGTTTTACAACCCGGAATTTGAGAGGCACAGTGAAGGATTTCGGGGAAAGAGTTCTTCTGATATGATAATTAGAAAAGAGGGGCAATTAGTTCCAAAGCTCAGGTGTCGGGTTATGGGAGCATATTTTGAGAAAATTGGGTCTGCATGTTTTGCTGTCTACTCAATTGCAGTGACTGATGCACAAAATAGAACTTGGTTTGTGAAAAGAAGATACAGGAATTTTGAGAGGTTGCATCGACAACTTAAAGATATTCCAAATTACACATTACATTTGCCTCCTAAAAGAATATTTTCCTCAAGCACTGATGATGCTTTTGTACATCAACGATGCATTCAGCTTGATAAATATCTCCAGGATCTCCTATCAATAGCTAATGTTGCTGAACAACATGAAGTATGGGACTTTTTTAGTGTTTCTTCAAAGAACTACTCTTTTGGGAAACCTTCTTCAGTGATGAAGACCTTGGCAGTCAATGTAGATGATGCTGTGGATGATATTGTACGACAGTTCAAGGGGGTTTCAGGTGGCTTACTGCGAAAAGTTGGTGGATCACCAACCCTCATCAATGAAGGAGCTTCTACATCTACAACATTGTACTTGCCCTGGAATGCAGATGAATTGGATAAAAGTACCTCAAGGCAGAGTACTACAGCAAGTGTGTTAAGTTCTGACACTGAGGAAGGTGATAGGAACAGTAATTTAGGCCATGATACTATTGATAGAGAAGAAGTACAAGGTAATGAAGGGCAATCCGAGAATGCTTTGATCTTGAAGGGTTATCCATCACTGGTAACAGATGATACTGAAGAGTCCAGCAACTTGGAATTTGATAGAAAGCGTGATCTGTCGGTGGAAGCTAGGGTTAGCAATGATGTTCCAGCTACAAATTTTGTTCTTAGTAATGATAATTTGGGGGATCCTGTTGGAGTGCCACCCGAGTGGACCCCACCTAATGTTAGTGTCCCTCTTTTGAATTTAGTTGACAAGATATTTCAGCTTAAGAAAAGAGGTTGGATAAGAAGACAGGTCTTTTGGATGTCAAAACAGATATTACAGTTGGTGATGGAAGATGCTATTGATGATTGGCTCCAGAGGCAGATTCATTGGCTTCGGAGAGAAGACACTGTTGCACAAGGGATTCGGTGGGTCCAAGATGTCCTTTGGCCTGGTGGTACGTTCTTTTTGAGAGTAGGGACACCTCAGATAACAAATGGTGGCAGTAATCAAAAGCCTTCTCAGACAATGGGAGAATCCGGGGGGCACAACATCATGAAGCATGAATCTGGGTCGTTTGAGCAACAGCTTGAGGCTGCTCGTAGAGAAAGTGACATCAAGAAACTGCTGTTTGACGGAGCTCCAACAACTTTAGTCAGCTTAATCGGGCATAAGCAATACAGACGTTGTGCGAGGGATATATATTACTTCAGTCAGTCTACTATATGTGTGAAGCAACTTGCCTATGCAATTCTGGAACTTCTACTTGTCACCATATTTCCTGAGATGAGGAATGTTGTGTTGAGTATTCATCATGAGAATGTTCATCAACCATCATGA 3120 0.4147 MKPIESFNDLIHEAKLRTLWWALSIFAVTYFLTNTSKSMWMNVPMSILFVCALRILVNNVEFRWKVKRPRSNTYLSHLEKKQLSLNDPRLSSAPSQTKWKRKIDSPVVEDAMGDFIDKILKDFVVDLWYSEITPDREFPEQIRAIIMDVLAEISARVKDINLVDLLTRDLVDLIGDHLELFRRNQAFIGVDVMKTLSSEERDDRLKFHLLNSKELHPALISPESEYKVLQRLMSALLATVLKQREAQCPVIRSISRELLTCLVMQPIMNLASPGFINELIESLLLLLNDDGKKWMAGDQSTNAASHHHGHSVATGGRHDNLTASNKHPSLNQGTDMILAKMSDPVETSSQYNALHQESSEAKPADWARMLEVATQRRTEILMPENLENMWAKGRNYKRKENKIVKTGFQDLPTKSPATDSSLPYQKMAQETLASKRGKYEAAEGKSSPPSDPLQRVAITNSSESSHIHDKKLSFEGELGIDKVKEGTKGSSSEGYKSSLKRSNSASALGIQPNKEGGSIISEFYNPEFERHSEGFRGKSSSDMIIRKEGQLVPKLRCRVMGAYFEKIGSACFAVYSIAVTDAQNRTWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTDDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFFSVSSKNYSFGKPSSVMKTLAVNVDDAVDDIVRQFKGVSGGLLRKVGGSPTLINEGASTSTTLYLPWNADELDKSTSRQSTTASVLSSDTEEGDRNSNLGHDTIDREEVQGNEGQSENALILKGYPSLVTDDTEESSNLEFDRKRDLSVEARVSNDVPATNFVLSNDNLGDPVGVPPEWTPPNVSVPLLNLVDKIFQLKKRGWIRRQVFWMSKQILQLVMEDAIDDWLQRQIHWLRREDTVAQGIRWVQDVLWPGGTFFLRVGTPQITNGGSNQKPSQTMGESGGHNIMKHESGSFEQQLEAARRESDIKKLLFDGAPTTLVSLIGHKQYRRCARDIYYFSQSTICVKQLAYAILELLLVTIFPEMRNVVLSIHHENVHQPS 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01683 1039 MobiDBLite consensus disorder prediction 431 455 - -
Car06g01683 1039 MobiDBLite consensus disorder prediction 751 769 - -
Car06g01683 1039 Pfam Sorting nexin C terminal 860 1001 IPR013937 -
Car06g01683 1039 Pfam PXA domain 105 283 IPR003114 -
Car06g01683 1039 MobiDBLite consensus disorder prediction 490 511 - -
Car06g01683 1039 Pfam PX domain 583 660 IPR001683 GO:0035091
Car06g01683 1039 PANTHER PX SERINE/THREONINE KINASE PXK 7 1038 - -
Car06g01683 1039 MobiDBLite consensus disorder prediction 298 331 - -
Car06g01683 1039 CDD PX_SNX19_like_plant 555 659 - -
Car06g01683 1039 MobiDBLite consensus disorder prediction 732 773 - -
Car06g01683 1039 MobiDBLite consensus disorder prediction 483 513 - -
Car06g01683 1039 ProSiteProfiles PX domain profile. 553 665 IPR001683 GO:0035091
Car06g01683 1039 Gene3D - 558 668 IPR036871 GO:0035091
Car06g01683 1039 MobiDBLite consensus disorder prediction 317 331 - -
Car06g01683 1039 SMART PXA_3 105 288 IPR003114 -
Car06g01683 1039 MobiDBLite consensus disorder prediction 732 750 - -
Car06g01683 1039 ProSiteProfiles PXA domain profile. 105 288 IPR003114 -
Car06g01683 1039 PANTHER SORTING NEXIN CARBOXY-TERMINAL PROTEIN 7 1038 - -
Car06g01683 1039 SUPERFAMILY PX domain 555 662 IPR036871 GO:0035091
Car06g01683 1039 SMART PX_2 551 661 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01683 Car-Chr6 16593336 16604610 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01683 K17925 - gmx:100793613 1576.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01683 06 16593336 16604610 Car06g01683 06 16593336 16604610 ECH