Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01463 ATGAGTTTCTACAATTCATTTTCTCGTTTTAGCCTCGTAATAATTTTATCCCTTGGTTTTTCACTCACCAATGCTCAAAACTCACCTCAAGACTATCTCAACGCCCACAACATAGCTCGTGCACAAGTTGGCGTTGCAAACATTACTTGGGACAACACAGTGGCGACTTATGCTTTAAACTACGCAAATTCAAGAATAGGTGATTGCAATTTGGTTCATTCAAGTGGATCTTACGGCGAGAATCTTGCCAAAGGATCAAGTGGTTCATTCACCGGAATTACTGCGGTAAATTTGTGGGTGAATGAAAAACAATACTATGATTATAACACTAATTCATGCATTAATGGTGGACAATGCTTGCACTATACTCAAGTTGTGTGGCGTAACTCTGTTCGTTTAGGGTGTGCTAGGGTACAATGCAACAATGGATGGTGGTTTGTCACTTGCAACTATGATCCCCCTGGTAATTGTATTGGCCAAAAACCCTATTAG 492 0.4024 MSFYNSFSRFSLVIILSLGFSLTNAQNSPQDYLNAHNIARAQVGVANITWDNTVATYALNYANSRIGDCNLVHSSGSYGENLAKGSSGSFTGITAVNLWVNEKQYYDYNTNSCINGGQCLHYTQVVWRNSVRLGCARVQCNNGWWFVTCNYDPPGNCIGQKPY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01463 163 CDD CAP_PR-1 29 163 - -
Car06g01463 163 PANTHER CAP (CYSTEINE-RICH SECRETORY PROTEINS, ANTIGEN 5, AND PATHOGENESIS-RELATED 1 PROTEIN) SUPERFAMILY PROTEIN 14 163 - -
Car06g01463 163 Pfam Cysteine-rich secretory protein family 33 151 IPR014044 -
Car06g01463 163 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Car06g01463 163 PRINTS Allergen V5/Tpx-1 family signature 95 108 IPR001283 -
Car06g01463 163 PRINTS Allergen V5/Tpx-1 family signature 119 135 IPR001283 -
Car06g01463 163 PRINTS Allergen V5/Tpx-1 family signature 146 159 IPR001283 -
Car06g01463 163 SMART SCP_3 27 159 IPR014044 -
Car06g01463 163 SUPERFAMILY PR-1-like 22 163 IPR035940 -
Car06g01463 163 Gene3D CAP 26 163 IPR035940 -
Car06g01463 163 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 14 163 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01463 Car-Chr6 14141682 14142173 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01463 K13449 - rcu:8268882 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01463 06 14141682 14142173 Car06g01463 06 14141682 14142173 ECH