Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01457 ATGGAAGACCACAATTTTGTTGTTGGTCAAGAATTCCCCGATGTGAAGGCATTTCGGAATGCGATTAAAGAAGCTGCTATTGCACAGCATTTTGAGCTTCGGATTATTAAAAGTGACCTGATTCGGTACTTTGCTAAGTGTGCATCCGATGGCTGTCCATGGCGGATTCGTGCTGTTAAGCTTCCCAATGCCTCAACGTTTACCATAAGAAGTCTTGAAGGGACACATACTTGTGGGAGAAATGCACTCAATGGGCACCATCAGGCTTCTGTTGATTGGATTGTGATTGAGCTGATTCATAGCAAACTTAAAACCGAGTTGGATGACAGGCGTTTGAAAAGTAGTTCGTGGTGTTCTGTGCTTGCTCCATCTGCTGAGAGGCGAATGGTTGAAGCCATTAATCGTGCATCCACATATCAAGCCCTTAGATCAGATGAGGTAGAGTTTGAGGTTATTTCAGCTGATCGATCCGATATTGTAAATATTGGCAGCCATAGCTGTTCCTGCCGTGATTGGCAGCTATATGGGATACCGTGTTCGCACGCTGTTGCTGCTCTTATGTCATGTCATAAGGACGTCTATGCATATACTGCCAAGTGTTTTACTGCTGCAAGTTACAATGATACCTATGCAGAGGTGTTACACCCCATCCCTGGAAAACATGAAAGGAAGAAAACAGATGAATCTATCTTGGATGATGATATCGTagttGTTTGTAATCAGAAGCTACTGAAGCCTGAATATAGGGAGGGTGGAAAATAA 762 0.4331 MEDHNFVVGQEFPDVKAFRNAIKEAAIAQHFELRIIKSDLIRYFAKCASDGCPWRIRAVKLPNASTFTIRSLEGTHTCGRNALNGHHQASVDWIVIELIHSKLKTELDDRRLKSSSWCSVLAPSAERRMVEAINRASTYQALRSDEVEFEVISADRSDIVNIGSHSCSCRDWQLYGIPCSHAVAALMSCHKDVYAYTAKCFTAASYNDTYAEVLHPIPGKHERKKTDESILDDDIVVVCNQKLLKPEYREGGK 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01457 253 PANTHER POLYPROTEIN, PUTATIVE-RELATED 1 95 - -
Car06g01457 253 PANTHER POLYPROTEIN, PUTATIVE-RELATED 113 223 - -
Car06g01457 253 Pfam MuDR family transposase 5 69 IPR004332 -
Car06g01457 253 Pfam SWIM zinc finger 156 189 IPR007527 GO:0008270
Car06g01457 253 SMART 26again6 165 192 IPR006564 GO:0008270
Car06g01457 253 ProSiteProfiles Zinc finger SWIM-type profile. 149 190 IPR007527 GO:0008270
Car06g01457 253 PANTHER OS01G0334000 PROTEIN 1 95 - -
Car06g01457 253 PANTHER OS01G0334000 PROTEIN 113 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01457 Car-Chr6 14072302 14074243 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01457 - - aprc:113859928 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01457 06 14072302 14074243 Car06g01457 06 14072302 14074243 ECH