Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01455 ATGGAAGCACATGCAGCAGAAGTTAACCACCGTATTGCAAGAATCTCTGCTCATCTGCACCCTTCAAATTTCAAGGAAGGAGGTGATGTTCTACTTAACAAAGCTAATTGCCGAGCCAAAGGCGGGGCACCTGGATTCAAAGTAGCAATCTTGGGGGCTGCCGGAGGAATTGGTCAACCCCTTGCTTTGCTGATGAAGATAAACCCATTGGTTTCAGTTCTTCATCTTTATGATGTTGTCAACACCCCTGGTGTCACAGCTGATGTTAGTCACATGGACACTGGTGCCGTGGTTCGCGGCTTTCTTGGGCAGCCACAACTTGATAATGCACTCACAGGCATGGACTTGGTAATTATACCTGCTGGTGTGCCAAGGAAACCTGGAATGACAAGGGATGATTTATTTAAGATAAATGCTGGAATTGTAAGGACCCTTTGTGAAGGAATTGCCAGGGCCTGCCCCAATGCAATTGTCAACTTGATTAGCAATCCAGTGAATTCCACTGTGGCAATTGCTGCTGAGGTATTCAAGAAAGCTGGTACATATGATCCAAAACGACTTTTAGGAGTTACAACTCTTGATGTGGTGAGGGCAAATACTTTTGTGGCAGAGGTACTTGGAGTTGATCCAAGAGAGGTTGATGTTCCGGTGGTGGGAGGTCATGCAGGAGTCACAATATTGCCTCTTTTGTCACAGGTTAAGCCTCCCAGTAGTTTCACTGCAGAAGAAGCTGAATACCTGACAAATCGCATCCAAAATGGTGGAACAGAAGTTGTTGAGGCAAAAGCTGGGGCTGGTTCTGCAACACTATCAATGGCATATGCAGCTGCTAAGTTTGCTAACTCATGCCTCCATGGCTTGAAAGGAGAAGCTGGGGTGGTGGAATGTGCTTTTGTTGATTCTCAGGTTACGGAACTTCCTTTCTTTGCAACCAAGGTTCGTCTCGGTCGCAGTGGAGCAGAAGAGATACATCAACTGGGTCCTCTGAATGAGTATGAGAGGATTGGGTTGGAAAAAGCAAAGAGTGAGTTAGCAGAAAGCATCAAGAAGGGAGTAGACTTCATCAAAAAATAA 1074 0.4581 MEAHAAEVNHRIARISAHLHPSNFKEGGDVLLNKANCRAKGGAPGFKVAILGAAGGIGQPLALLMKINPLVSVLHLYDVVNTPGVTADVSHMDTGAVVRGFLGQPQLDNALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTLCEGIARACPNAIVNLISNPVNSTVAIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGVDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTAEEAEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFANSCLHGLKGEAGVVECAFVDSQVTELPFFATKVRLGRSGAEEIHQLGPLNEYERIGLEKAKSELAESIKKGVDFIKK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01455 357 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 191 354 IPR022383 GO:0016616
Car06g01455 357 ProSitePatterns Malate dehydrogenase active site signature. 190 202 IPR001252 GO:0006108|GO:0016615
Car06g01455 357 Gene3D - 38 190 - -
Car06g01455 357 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 47 356 IPR010097 GO:0006099|GO:0030060
Car06g01455 357 PIRSF Lac_mal_DH 45 356 IPR001557 GO:0016616|GO:0019752
Car06g01455 357 PANTHER MALATE AND LACTATE DEHYDROGENASE 7 357 - -
Car06g01455 357 PANTHER MALATE DEHYDROGENASE 2, PEROXISOMAL 7 357 - -
Car06g01455 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 189 IPR036291 -
Car06g01455 357 Gene3D - 191 357 IPR015955 GO:0003824|GO:0016616
Car06g01455 357 SUPERFAMILY LDH C-terminal domain-like 190 356 IPR015955 GO:0003824|GO:0016616
Car06g01455 357 CDD MDH_glyoxysomal_mitochondrial 46 355 IPR010097 GO:0006099|GO:0030060
Car06g01455 357 Pfam lactate/malate dehydrogenase, NAD binding domain 47 189 IPR001236 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01455 Car-Chr6 14048733 14052460 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01455 K00026 - gmx:100170735 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01455 06 14048733 14052460 Car06g01455 06 14048733 14052460 ECH