Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01452 ATGGCTTCATCCGAGATCCAGGTTGTATCATCGGAGTCCAAGCCCCAACAAGACCACCAACCTCCAATACTCGATGTTTTCACTGCTTCTGCTCATGGCGACTTTCAAAAATTGAGGACTTTCGTTGAACAACACGCTGCTTCTGTTTCTGTTTCCGATGTTAATGGCTATTATGCTCTTCAATGGGCATCTCTCAATAACTTCCACGAAATTGTCCACTATCTCATTCAGCATGGGGCTAATGTCAATGCTAAAGACAACATGCAACAAACGGCTTTGCATTGGGCAGCAGTTCGTGGTTCAATTGCAGCTGCTGACGTGCTCTTGGAGAATGGTGCTCGGGTTGAAGCCGCTGATATAAATGGATACCGGGCAGTTCACGTTGCTGCACAATATGGGCAGACTGCTTTCTTGAATCACATTGTTGTAAAATACCATGCCGATTTTGACGTGCCTGATAATGACGGAAGGAGTCCCCTACATTGGGCTGCGTATAAGGGATATGCTGATACAATAAGATTGCTTCTATTTAGAGATGCAAGTCAAGGAAGACAAGATAAAGATGGTTGTACGCCGTTGCATTGGGCTGCATTAAGAGGACATTCAGAGGCGTGCGCTGTGCTTGTGCATGCTGGGACGAAGGAAGAATTGATGGTGAAGGACAATGCAGGATTCACTCCTGTACAAATAGCACATGATAAAGGTCATCGACATGTCGCCCCTTTCCTTTCTAATCAACAACGGGCTCATAATCACTGGAGAGGCAAACTTTATTGTGGGGTGGTGACAGACATTGGTTATGCTCCCATTTTATTGTGTATTATAGTATTTCTCTCGATCCTCTTCATCAATTCAATTGTTGCAGCTCCTAACCTTAAAAAGATTACCGCTGTTGTTGGACTTTGGTCATGGATAGCTCTCTCTCTAGTAGCTGCTTCCTTGATTATGTTTTATAGGTGTAGTAGTAAAGATCCAGGTTATATAAAACGGCCAGGAGACTTGGGATCTCTAAGCGATGCAGAGGATCCTTTGTTGAATATTGAGCTGAACAGTTCCTCTGTTTGGATGGGAAATTGGTCTCAACTTTGCCCTACCTGCAAGATAATAAGACCTGTCCGATCTAAGCATTGCCCTACTTGTAAGCGTTGTGTGGAACAGTTTGACCACCATTGTCCATGGATATCTAATTGTGTTGGGAAGAAGAACAAAAGGGATTTCTTTATTTTTATTTGCCTGGGAACTATGACTTCTCTTGTCAGTGGCGCCGTTGCTATTCAAAGAGCGTGGACATCAATACCAGCATTACCAGCAGGAGaaacatggatccatcaggtgttagtaaaccatccaggtcttgttgcattttTGGTGATGGATGCTGTTGTCGTCATTGCAGCTACAACTTTGACAGTAACACAGATTTCCATGATAGCACGAAATGTGACCACAAATGAACTAGCGAATTCCACAAGGTATGAGTATCTTCGTGGTCCAGATGGGCGGTTCAGAAACCCATATAATCATGGTTGTTGGAAGAATTGTGCTGATTTTGTCTTTCTGGGCCACACAGATGATGATGGTATTGCTTGGCCACCATTACAGCAGGTGGCTTCTTAG 1617 0.4261 MASSEIQVVSSESKPQQDHQPPILDVFTASAHGDFQKLRTFVEQHAASVSVSDVNGYYALQWASLNNFHEIVHYLIQHGANVNAKDNMQQTALHWAAVRGSIAAADVLLENGARVEAADINGYRAVHVAAQYGQTAFLNHIVVKYHADFDVPDNDGRSPLHWAAYKGYADTIRLLLFRDASQGRQDKDGCTPLHWAALRGHSEACAVLVHAGTKEELMVKDNAGFTPVQIAHDKGHRHVAPFLSNQQRAHNHWRGKLYCGVVTDIGYAPILLCIIVFLSILFINSIVAAPNLKKITAVVGLWSWIALSLVAASLIMFYRCSSKDPGYIKRPGDLGSLSDAEDPLLNIELNSSSVWMGNWSQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKKNKRDFFIFICLGTMTSLVSGAVAIQRAWTSIPALPAGETWIHQVLVNHPGLVAFLVMDAVVVIAATTLTVTQISMIARNVTTNELANSTRYEYLRGPDGRFRNPYNHGCWKNCADFVFLGHTDDDGIAWPPLQQVAS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01452 538 PANTHER - 4 525 - -
Car06g01452 538 PANTHER PROTEIN S-ACYLTRANSFERASE 24 4 525 - -
Car06g01452 538 Pfam Ankyrin repeats (3 copies) 119 184 IPR002110 GO:0005515
Car06g01452 538 Pfam Ankyrin repeats (3 copies) 31 118 IPR002110 GO:0005515
Car06g01452 538 ProSiteProfiles Ankyrin repeat region circular profile. 88 119 - -
Car06g01452 538 ProSiteProfiles DHHC domain profile. 361 411 - -
Car06g01452 538 ProSiteProfiles Ankyrin repeat region circular profile. 155 181 - -
Car06g01452 538 ProSiteProfiles Ankyrin repeat region circular profile. 188 212 - -
Car06g01452 538 MobiDBLite consensus disorder prediction 1 18 - -
Car06g01452 538 Gene3D - 130 192 IPR036770 -
Car06g01452 538 Pfam DHHC palmitoyltransferase 361 488 IPR001594 GO:0016409
Car06g01452 538 Pfam Ankyrin repeat 188 221 IPR002110 GO:0005515
Car06g01452 538 ProSiteProfiles Ankyrin repeat profile. 55 87 IPR002110 GO:0005515
Car06g01452 538 Gene3D - 24 129 IPR036770 -
Car06g01452 538 ProSiteProfiles Ankyrin repeat profile. 88 120 IPR002110 GO:0005515
Car06g01452 538 MobiDBLite consensus disorder prediction 1 21 - -
Car06g01452 538 ProSiteProfiles Ankyrin repeat region circular profile. 55 87 - -
Car06g01452 538 SUPERFAMILY Ankyrin repeat 27 245 IPR036770 -
Car06g01452 538 ProSiteProfiles Ankyrin repeat profile. 155 187 IPR002110 GO:0005515
Car06g01452 538 Gene3D - 193 246 IPR036770 -
Car06g01452 538 ProSiteProfiles Ankyrin repeat profile. 188 220 IPR002110 GO:0005515
Car06g01452 538 SMART ANK_2a 155 184 IPR002110 GO:0005515
Car06g01452 538 SMART ANK_2a 55 84 IPR002110 GO:0005515
Car06g01452 538 SMART ANK_2a 88 117 IPR002110 GO:0005515
Car06g01452 538 SMART ANK_2a 188 217 IPR002110 GO:0005515
Car06g01452 538 SMART ANK_2a 121 151 IPR002110 GO:0005515
Car06g01452 538 ProSiteProfiles Ankyrin repeat profile. 121 154 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01452 Car-Chr6 14031897 14038902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01452 42 236 Miscellaneous Gene Families AT1G05640 29.353 2.03e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01452 K20032 - gmx:100798740 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01452 06 14031897 14038902 Car06g01452 06 14031897 14038902 ECH