Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01138 ATGGAAATGATGCTTTCTCGGTTACCTTACCAGGATTCCGTCAAAATTCTCGAGGCTGATATTCACCATGCCAATGCTTTGGCTGCTGCAATTCCAAGAGGCAAGGGTGGGAGTATTTTCCAAATGAAATTGGTTTACAGTCAATTGGCACCTCTTTTTTTGTTGTTGTTACAGTGGATGGATTGTTCTTGTTCATGCTTTCTACACAGATATCTTAACCTCTTTCACATAATTATTTACAAGGTACATAATGATGGTAGGCCAAGCATAGCTTCTCATGGAAGAAAAGCAACCATCCAGGACTTTTATGCTGTTATATTGCCGTCTCTCCAGCGGCTTCATGGTAGCTTGGAGAAATTGGAGATTTGTAAGAAAGGGCACACTAACTTAGAAGGTTCAAGTTATAGCAAGAAGATGATTGAAGCAAATGCGAAACTAACCAGTGTTGATTTGGAAAGAGAAGATGAATGTGGGATATGCTTAGAACCATGCACTAAAATGGTTCTGCCTAATTGCTGTCATGCTATGTGTATCAAATGCTACCGCAAGTGGTGA 555 0.4018 MEMMLSRLPYQDSVKILEADIHHANALAAAIPRGKGGSIFQMKLVYSQLAPLFLLLLQWMDCSCSCFLHRYLNLFHIIIYKVHNDGRPSIASHGRKATIQDFYAVILPSLQRLHGSLEKLEICKKGHTNLEGSSYSKKMIEANAKLTSVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKW 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01138 184 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 184 - -
Car06g01138 184 SUPERFAMILY RING/U-box 147 184 - -
Car06g01138 184 PANTHER RING FINGER PROTEIN 41, 151 4 184 - -
Car06g01138 184 ProSitePatterns Zinc finger RING-type signature. 172 181 IPR017907 -
Car06g01138 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 184 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01138 Car-Chr6 11089492 11092361 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01138 - - aprc:113854978 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02056 05 65820099 65821986 Car06g01138 06 11089492 11092361 PCT