Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01083 ATGTCTGCTGCTGTAGGAGCTGTGTCCACTACCAAAGATGTTACCTTTAATGTTCATTTGGAAGAAGAGCACAAAAACAAAGGAACCAACAAGGTTGGTGGGGAATTAGACAAGATTCCTTGTAGTGATGATGGTGTTAACTATGATTATGTTGAGGAAATTGAGCAAGAGGAAGATGAAGACACCAAGTTGGAATTGGATCTTGGCCCTCAGTTTTCTCTCAAGGAACAGCTTGAGAAAGATAAAGATGATGAAAGTTTGAGGAAATGGAAAGAGCAACTTCTAGGAAATGTTGATGTGTCTGCTGTTGGAGAGAAAATAGAGCCAGAAGTGAAGATAGTGAGCCTCACCATTATATGCCCAGGAAGGTCTGAAATCATATTGCCAATTCCATTCACAACTGATTCCAAAAAGACTATATTCACTCTCAAGGAAGGAAGCCAATACAGGCTTAAATTCTCCTTCACTGTCTCCAACAACATTGTATCTGGCCTCAAATACACTAATGTAGTTTGGAAAACTGGGGTTAGAGTGGACAAGACAAAGAAAATGTTAGGAACTTATAGCCCACAGCAGGAACCATATACATATGAATTGGAAGAAGAAATGACCCCTTCAGGCTTGTTTGCTAGGGGAACCTATTCAGCAAGAACCAAGTTTGTAGATGATGATCGCAAATGCTACTTGGATGCTAGTTATCGTTTTGAGATTCAGAAGAATTGGCCTGCACCCCTATGA 738 0.4038 MSAAVGAVSTTKDVTFNVHLEEEHKNKGTNKVGGELDKIPCSDDGVNYDYVEEIEQEEDEDTKLELDLGPQFSLKEQLEKDKDDESLRKWKEQLLGNVDVSAVGEKIEPEVKIVSLTIICPGRSEIILPIPFTTDSKKTIFTLKEGSQYRLKFSFTVSNNIVSGLKYTNVVWKTGVRVDKTKKMLGTYSPQQEPYTYELEEEMTPSGLFARGTYSARTKFVDDDRKCYLDASYRFEIQKNWPAPL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01083 245 Pfam RHO protein GDP dissociation inhibitor 53 240 IPR000406 GO:0005094|GO:0005737
Car06g01083 245 PANTHER RHO GDP-DISSOCIATION INHIBITOR 11 243 IPR000406 GO:0005094|GO:0005737
Car06g01083 245 Gene3D Coagulation Factor XIII, subunit A, domain 1 63 243 IPR024792 -
Car06g01083 245 PRINTS RHO protein GDP dissociation inhibitor signature 161 177 IPR000406 GO:0005094|GO:0005737
Car06g01083 245 PRINTS RHO protein GDP dissociation inhibitor signature 178 193 IPR000406 GO:0005094|GO:0005737
Car06g01083 245 PRINTS RHO protein GDP dissociation inhibitor signature 220 237 IPR000406 GO:0005094|GO:0005737
Car06g01083 245 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 11 243 - -
Car06g01083 245 SUPERFAMILY E set domains 51 242 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01083 Car-Chr6 10468312 10470611 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01083 K12462 - gmx:100806852 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01997 05 65288763 65290454 Car06g01083 06 10468312 10470611 PCT