Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00856 ATGGCATCAACAATAGTAGCAATGACCCTAATCAACTCAAACACCTTGAACACAACAAATTCACCAAAATTCCCCAACCCCACAAAACTCATCACGAAAGCCACTTCCCTAAAGAACATAACCACAACATTAAACACAACAAAACTAACAACTTCCATAACAGGAACAGCACTAGCAGGAGCAGTATTCTCAACACTTGGAACATGTGACCCAGCTTTTGCAGCACAACAAATAGCTGAAATAGCAGAAGGAGGAGATAACCGTGGATTAGCACTTTTGTTACCAATAATTCCAGCCATAGGTTGGGTTCTATTCAACATTCTTCAACCAACACTTAACCAAATCAACAAAATGCGTAACTCAAAAGGTGTTATCATTGGTTTGGGTCTTGGTGGTTTAGCTTCTTCAAGTTTTATTTCAACTAAAGATGCAATGGCTAATGATATCGTTTCCATTGCTGAAGCTAGTGGTAGTGACAATAGGGGTCAGCTTCTGTTGTTTGTTATTGCTCCAGCTATTCTTTGGGTTCTTTACAACATTTTGCAACCTGCTCTTAATCAAATCAACAAAATGAGATCAAAGTGA 585 0.3863 MASTIVAMTLINSNTLNTTNSPKFPNPTKLITKATSLKNITTTLNTTKLTTSITGTALAGAVFSTLGTCDPAFAAQQIAEIAEGGDNRGLALLLPIIPAIGWVLFNILQPTLNQINKMRNSKGVIIGLGLGGLASSSFISTKDAMANDIVSIAEASGSDNRGQLLLFVIAPAILWVLYNILQPALNQINKMRSK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00856 194 Hamap Photosystem II protein Y [psbY]. 86 120 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Car06g00856 194 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 194 - -
Car06g00856 194 Pfam Photosystem II protein Y (PsbY) 159 191 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Car06g00856 194 Pfam Photosystem II protein Y (PsbY) 86 118 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Car06g00856 194 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 194 IPR038760 GO:0009523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00856 Car-Chr6 8385340 8385924 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00856 K02723 - zju:107428525 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00856 06 8385340 8385924 Car06g00856 06 8385340 8385924 ECH