Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00854 ATGCTGGATAACGCTGCCGTGCGAATAAGTGGCAAAAGCCTGATTCTGCCCCCCCTCTTTTCTTTGACATGTGCCATTTTAAAGGTTGCTATTTTGATTTTACGCGATTCTCTCCTTCGAAACCATTTCAGGGTTAGAATCCCTTTAGGTCTTTACCTCAAACAAATCCCAGTTGTCCATTTCCCTCAATTTCCGGCCCACATGTTCTGCTGCACTTCTGGCCAGCCACACATTTTAGGGCGAAGGTTGACCCTTTTCCAACTGAGGATAGCACTTCATTTTGCAGTCACTGTTCTGACCTTCCTCTGTTGCCTCTGTTTGCAACTCGCAGATATGTTCGATCTTCTATCCTTCCGTTGCCCTGTTCACAGACATTGTGGACTGTGGCTGCACTGCTATTGTGGATTGACTACCATGCTTCTAAGCCAGGTAACAGGAGGGAAAAGACTTAGCACAATTTTCCTGTTTGGTGGGTCTAAAACTAAACAGTGCTCTACTCAGGTGAAGCTAGAAATCACACGGTCTATTATAAAAGCATCCCCACCCATCGATCCACCTCCAATCTTCACCACTTTTACGCTCTTTCTCATGGACCCTGCTGCTTCTCGTCCTGCTGTAGTAATCGACAATGGCTCCGGGTATACGAAGATGGGGTTTGCTGGTAATGTTGAACCCTGTTTTATTGTTCCAACAGTGGTTGCAATTAACGAGTCGTTTCTGAATCAATCGAGGAGTTCTTCTAAGGGAAATTGGGTTGCACAACATAATGCAGGAGTTATGGCTGATCTTGATTTCTTTATTGGAGATGATGCACTTTCAAAGTCTCGATCTAGCAGCACTTATAATCTCACTTACCCGATTCGGCATGGTCAGGTTGATAACTGGGATGCCATGGAGCGATTTTGGCAGCAGTGTATATTCAATTATTTGAGGTGTGATCCCGAGGATCATTATTTTCTCTTGACTGAGAGTCCGTTGACAGCCCCCGAGAGTCGTGAGTATACTGGCGAAATCATGTTTGAGACTTTTAATGTGCCTGGACTTTACATTGCTGTGAATTCTGTGCTTGCTCTGGCTGCTGGTTACACAACGTCTAAGTGTGAGATGACAGGAGTTGTAGTTGATATTGGAGACGGGGCTACACATGTTGTACCAGTTGCGGATGGTTATGTTATTGGAAGTAGCATCAAATCGGTTCCTATTGCTGGAAAGGATGTTACTCTTTTTGTCCAGCAGCTAATGCGGGAAAGAGGGGAGAATGTACCCCCAGAAGACTCTTTTGAAGTGGCTCGGAAAGTGAAAGAAATGCATTGCTACACCTGCTCTGACATAGTGAAGGAATATAATAAGCATGACAAAGAACCAGCCAAGTATATCAAGCAATGGCGAGGTGTTAAACCAAAGACTGGGGCTCCATATTCTTGTGATATTGGCTATGAACGCTTTCTTGGCCCCGAGGTTTTCTTTAATCCTGAAATATATAGCAGCGACTTTTCCACTCCTTTGCCAGTTGTAATAGACAAGTGCATTCAGTCTGCACCAATTGACACAAGGAGATCACTATATAAGAATATAGTGCTGTCAGGAGGATCAACAATGTTCAAGGATTTTCACAGGAGATTGCAACGTGATCTAAAGAAAATCGTGGATGCTCGTGTCCTTGCAGCTGAAGCGCGCCTAAATGGGGAGATAAAATCACATCCAGTGGAAGTCAATGTAGTCAGCCATCCTATCCAAAAATTTGCCGTTTGGTTTGGAGGATCAGTGCTTGCATCAACACCTGAATTTTTTACGGCTTGTCATACAAAGGCAGAATATGAAGAATATGGAGCAAGCATTTGCCGCACAAATCCTGTTTTCAAGGGGATGAGATTAAATTCGTTGGAATCGAATTGTAATACTAATAAGGCTGTCCAGTTCCTTTTCTTTTTAGCTCGACTTGTGGAGCTGCAATTGAAAATGAGACAGATTGTGTCAAGGCATTATTATTTTTTTGAAAAAATTGGAAAATGGCGTCGGATTCAACCAGCTCTTCGTCCACCTCTAATCTTAAGCGCCAGAAGTTGA 2067 0.4354 MLDNAAVRISGKSLILPPLFSLTCAILKVAILILRDSLLRNHFRVRIPLGLYLKQIPVVHFPQFPAHMFCCTSGQPHILGRRLTLFQLRIALHFAVTVLTFLCCLCLQLADMFDLLSFRCPVHRHCGLWLHCYCGLTTMLLSQVTGGKRLSTIFLFGGSKTKQCSTQVKLEITRSIIKASPPIDPPPIFTTFTLFLMDPAASRPAVVIDNGSGYTKMGFAGNVEPCFIVPTVVAINESFLNQSRSSSKGNWVAQHNAGVMADLDFFIGDDALSKSRSSSTYNLTYPIRHGQVDNWDAMERFWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDIGDGATHVVPVADGYVIGSSIKSVPIAGKDVTLFVQQLMRERGENVPPEDSFEVARKVKEMHCYTCSDIVKEYNKHDKEPAKYIKQWRGVKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFSTPLPVVIDKCIQSAPIDTRRSLYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLAAEARLNGEIKSHPVEVNVVSHPIQKFAVWFGGSVLASTPEFFTACHTKAEYEEYGASICRTNPVFKGMRLNSLESNCNTNKAVQFLFFLARLVELQLKMRQIVSRHYYFFEKIGKWRRIQPALRPPLILSARS 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00854 688 Pfam Actin 203 615 IPR004000 -
Car06g00854 688 Gene3D Actin; Chain A, domain 4 401 499 - -
Car06g00854 688 PANTHER ACTIN 203 617 IPR004000 -
Car06g00854 688 Gene3D - 354 582 - -
Car06g00854 688 Gene3D - 206 610 - -
Car06g00854 688 SUPERFAMILY Actin-like ATPase domain 369 618 IPR043129 -
Car06g00854 688 SUPERFAMILY Actin-like ATPase domain 203 373 IPR043129 -
Car06g00854 688 PANTHER ACTIN-RELATED PROTEIN 3-LIKE 203 617 - -
Car06g00854 688 SMART actin_3 203 619 IPR004000 -
Car06g00854 688 CDD NBD_sugar-kinase_HSP70_actin 206 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00854 Car-Chr6 8373932 8382910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00854 205 614 Miscellaneous Gene Families AT2G42100 34.878 3.86e-71 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00854 K18584 - zju:107428515 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00854 06 8373932 8382910 Car06g00854 06 8373932 8382910 ECH