Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00852 ATGACAATGGTACCCCGGAAGATGCAATCTAGAGCTATTCGTCATATTTTTTCGGCATCTGATGACACGGTTATGACAAAACAAATCAGCGCCACTCATGCTCCTATTGAAGAGCATGTTGATGTTAGACCTTTATTGAATGTTGTTCAAGACATTTTTCACCGTGCAACTTCTCTCATCCCCGACATCCTTCAgGGAAAGCAAACACAAATGAGTGCCTCAAAGGAAAATGCCAATCAATCCGACTTATCTGACATACTAGAGATTTCTTATCACACAATTAACAAAATTGCATGCGAGATATCTTGCAAATGTATGATGGGTGGTGGAGATGCTCATGCAACAACAATAGGAATACTTGGAATGCTATCAAGCTTTTCATGGGATGCAAAAGTGGGGATAGCATTAGCAGCATTTGCATCAAACTTAGGAGAGTTTTGGCTGGTGGCTCAACTTAATGCAACCAACCGTCTTGCTAAGTCAGTTGCATTGTTGAAGCACATTCATGAAACATTGGAGCAAGTGGATGATTTGGGACCAAAATTTGAAACTGTGAACAACCTTCTCAATGCCATGTTCGTTGTTGCCAATTGCATTGTTGAGTTCCATGAGCTTCCTTCTCAGTATATTGACCATGAAGCACCTGAAATGTTGACTGCATCCACTCTTATTCCTAGTGCTGTCTATTGGACCATTAGGAGTATTGTGGCATGTGCATCACATATTTTGGGCATTATTGGCTTGGGTCAAGGATATATGACATCAACAATAGAGACATGGGAGCTTTCCAGTTTGACTCATAAGCTAGATAACATGAATGATCACCTTCAAAAGCAGCTCACCATTTGTCATCAACATTTAGAtgacaacaaacagagagaagcatttcaaacacttgagatcctttttgagacatcacaccaagataacaTTAATGTTCTCAAAGCTTTGATTCGCTGCAAGGATGATCCATTGCCACTGTTTGATGGTTCTACCAAGCAAAGGGTTAGCATTGATGTATTGAGAAGCAAAATTGTGTTGCTCTACATAACAGACCTACAACATATATCTGAACAAGAGCTTGTTATATTTGGACAAATGTATCAAGACTCGCGCCAAGATTCGACAAGGTTAGAGAGTCAATACGAACTCGTTTGGATTCCAATTGTCGAAAAGGGAACACTGTGGACTGAATCGAAACAGAGGTTCGAGAGGCTGCAATCAATGATGCCATGGTACTCAGTTTATGACCCTTCAGTTTTGGAGGCAGCAACAATAAGGTATATTAAGGAGGTTTGGCTTTTCAACACAAAGCATATGCTTGTGGTGTTGGATCCACAAGGGAAAGTTGTGAACCTTAATGCAATACACGTGATGTGGATTTGGGGAAGCTTGGCTTATCCTTTCTCTAGCTTAAAGGAGGAAGCACTTTGGAAAGAGGAAACATGGGGACTTGCACTTTTGGCAGATACAATTGATGAATCACTCTTTGAATGGGTATCAGCAGGCAAATACATATGCTTGTATGGAGGGGACGACATTGAATGGATTAGGAAATTCACAAGCTCCGCAAAATCAATGGCAAAAACTCTGCAAATTCCTCTAGAAATAATGTATGTTGGGAAAAGCAACCCAGGGGAGAAAATTAGAAAAATCAACAAAACCATAAATGAAGAAAAACTTAGCAACGTACTCGCCTATCCAACAATAAATTGGTTTTTCTGGGTTAGGCTAGAAAGCATGTGGCATTCCAAATTACAACAGGGCAATACAGTGGAGAATGACCAAATAATGTTAGAAATAGTGAGAATCCTAAGCTTTGATAGCAGTGATCAAGGTTGGGCTGTGATAAGTCAAGGAACTGTGAAAATGACACAGGGAAAAGGTGACTCATTTTTGAAATGTGTGGTTGAATTTGAAGAGTGGAAGGATAATGCAAAAGATAAAGGAGTTTTGGCTGCAATGGATGATTATATACAAGGAATCCAAACACCACATCATTGTAACAGGTTAATACTGCCAGGAGTTGATGGCAGAACTCCAGAGCAGATTATATGTGCGGAATGTCGTCAGCCTATGGAAAAATTCTACATGTATCGCTGCTGCAACGAGTGA 2115 0.3891 MTMVPRKMQSRAIRHIFSASDDTVMTKQISATHAPIEEHVDVRPLLNVVQDIFHRATSLIPDILQGKQTQMSASKENANQSDLSDILEISYHTINKIACEISCKCMMGGGDAHATTIGILGMLSSFSWDAKVGIALAAFASNLGEFWLVAQLNATNRLAKSVALLKHIHETLEQVDDLGPKFETVNNLLNAMFVVANCIVEFHELPSQYIDHEAPEMLTASTLIPSAVYWTIRSIVACASHILGIIGLGQGYMTSTIETWELSSLTHKLDNMNDHLQKQLTICHQHLDDNKQREAFQTLEILFETSHQDNINVLKALIRCKDDPLPLFDGSTKQRVSIDVLRSKIVLLYITDLQHISEQELVIFGQMYQDSRQDSTRLESQYELVWIPIVEKGTLWTESKQRFERLQSMMPWYSVYDPSVLEAATIRYIKEVWLFNTKHMLVVLDPQGKVVNLNAIHVMWIWGSLAYPFSSLKEEALWKEETWGLALLADTIDESLFEWVSAGKYICLYGGDDIEWIRKFTSSAKSMAKTLQIPLEIMYVGKSNPGEKIRKINKTINEEKLSNVLAYPTINWFFWVRLESMWHSKLQQGNTVENDQIMLEIVRILSFDSSDQGWAVISQGTVKMTQGKGDSFLKCVVEFEEWKDNAKDKGVLAAMDDYIQGIQTPHHCNRLILPGVDGRTPEQIICAECRQPMEKFYMYRCCNE 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00852 704 PANTHER SIEVE ELEMENT OCCLUSION-RELATED 1 704 - -
Car06g00852 704 Pfam Sieve element occlusion N-terminus 20 307 IPR027942 -
Car06g00852 704 Pfam Sieve element occlusion C-terminus 473 703 IPR027944 -
Car06g00852 704 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 704 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00852 Car-Chr6 8353644 8357313 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00852 - - gmx:100799626 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00852 06 8353644 8357313 Car06g00852 06 8353644 8357313 ECH