Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00850 ATGGGTATGTGGTGGCGGTGCATGTTTCTTTTAATCGGAGCAACCATATTGGTAGCGGAGCCGGTGGTGGCGGTGAGTGACGCTCTTTCACTTAAAACGAGTTCACGATGGATCGTGAATCAAGATGGAGAAAGAGTGAAACTAGCGTGTGTAAATTGGGTTTCTCATTTGGATGCTGTGGTGGCTGAAGGGCTTAGTAAAAAGCCCGTGGATGTGATTTCTCATGGAATAAAGTCCATGGGCTTTAACTGTGTTAGACTCACTTGGCCTATTCTTCTTCTCACAAATCAATCTCTTTCTTCTCTCACTGTTAGACAATCTTTTCAGAACCTTGGCCTTCTTGACACTATCGCTGGTTTCCAATCTAATAACCCTTCCATCATCGATCTTTCCCTCATACATGCTTTTCAGGCAGTTGTGAAAAGTCTTGGGGACAATGATGTGATGGTGATTTTGGACAACCACATGACCCAACCAGGATGGTGTTGCAGTAACACTGATGGCAATGGCTTCTTTGGTGACCAATATTTTGACCCGAACCTTTGGATTTTGGGCCTCACCAAAATGGCCACCCTTTTCAATGGAGTGCCTACTGTGGTTGCCATGAGCTTGAGGAATGAACTCAGAGGCCCAAAACAGAATGTCAACGATTGGTACAGGTATATGGTGCAAGGAGCTGAAGCAGTTCATGCATCAAATCCAGATATTCTTGTCATACTATCTGGATTAAATTTTGACAAAGACTTGTCATTCATTGCCAAAAGAGCAGTGAACTTAACATTCACCGAGAAACTAGTATTTGAAGCACACTGGTATGGTTTCACTGATGGTCAAGCTTGGGAATCAGGGAACCCAAATCAAGTATGTGGACAAGTGTCTGGAAATATGAAGAGAATGTCTGGTTACTTAGTGAACCAAGGGTGGCCTTTGTTTGTGAGTGAATTTGGGAGTGACTTAAGAGGTACCAATGTCAATGATAACCGTTTTCTTAACTGCTTTATAGCATATGCAGCTGATCTTGATTTGGATTGGGCCTTGTGGACATTAGTTGGAAGTTACTATTTTAGACAAGGGGTTATAGGAATGGAAGAGTTTTATGGGATTCTCAATTGGGATTGGACCCAACTTAGAAATATTAGCTTCATACAAAGGATTGCTTCCCTCCAACTTCCTTTTCAAGGTCCAGGCATAACAGAAGGAAGTCCACACAAACTAATATTCCATCCTTTAACTGGTCTTTGTGTGATAAGAAAGTCACTTGTAGAGCCATTAATGTTAGGTCCATGCTCTCTTTCTGATGGTTGGAATTACTCACCCCAAAAGACATTATCAATAAAAGGTACATACTTTTGCATTCAAGCACAGAAACAAGGAGTGCCAGCTATACTTAGCATAATGTGCTCGGATCCTAACTCTATATGGGACATGATCTCAGACTCCAAGTTGCATCTTTCATCAAACATTAATAATGGAACAAAGGTTTGTCTAGATGTTGATGATAACAATGTTATTGTGACCAATGCTTGTAAATGTTTGAGCAATGATCATACATGTGACCCTGCAAGTCAATGGTTCAAACTTATTGACAGTGGGAGGAGGTTAATCTCGACAACCTCAACATTGTCCGAGCTAAATTTGTTGGAGCTTTTTATGAAACGGTTGTGA 1665 0.4126 MGMWWRCMFLLIGATILVAEPVVAVSDALSLKTSSRWIVNQDGERVKLACVNWVSHLDAVVAEGLSKKPVDVISHGIKSMGFNCVRLTWPILLLTNQSLSSLTVRQSFQNLGLLDTIAGFQSNNPSIIDLSLIHAFQAVVKSLGDNDVMVILDNHMTQPGWCCSNTDGNGFFGDQYFDPNLWILGLTKMATLFNGVPTVVAMSLRNELRGPKQNVNDWYRYMVQGAEAVHASNPDILVILSGLNFDKDLSFIAKRAVNLTFTEKLVFEAHWYGFTDGQAWESGNPNQVCGQVSGNMKRMSGYLVNQGWPLFVSEFGSDLRGTNVNDNRFLNCFIAYAADLDLDWALWTLVGSYYFRQGVIGMEEFYGILNWDWTQLRNISFIQRIASLQLPFQGPGITEGSPHKLIFHPLTGLCVIRKSLVEPLMLGPCSLSDGWNYSPQKTLSIKGTYFCIQAQKQGVPAILSIMCSDPNSIWDMISDSKLHLSSNINNGTKVCLDVDDNNVIVTNACKCLSNDHTCDPASQWFKLIDSGRRLISTTSTLSELNLLELFMKRL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00850 554 Pfam Cellulase (glycosyl hydrolase family 5) 71 349 IPR001547 GO:0004553|GO:0071704
Car06g00850 554 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 9 543 - -
Car06g00850 554 SUPERFAMILY Ricin B-like lectins 401 527 IPR035992 -
Car06g00850 554 Gene3D Glycosidases 29 388 - -
Car06g00850 554 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 9 543 - -
Car06g00850 554 SUPERFAMILY (Trans)glycosidases 30 378 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00850 Car-Chr6 8340260 8344103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00850 31 537 Glycoside Hydrolase AT1G13130 59.295 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00850 - - gmx:100790415 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00850 06 8340260 8344103 Car06g00850 06 8340260 8344103 ECH