Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00840 ATGGAGGCGATGGGAGAGAAATGGGGAAAAGTAATATTATGGGTTGTAATTTCAACAACAATAATAGCTATAGCTATGGTACCAACTGTCACTTGTGCAAAACAGTGTAGCTTTCCGGCCATATTCAACTTCGGAGACTCCAATTCCGACACAGGTGCTATCTCAGCAGCTTTTGGACAAGCTCCTCCTCCCAACGGAATCACTTTTTTCCACACTCCCGCCGGTCGCTTTTCCGATGGTCGTCTCATTATTGATTTCATAGCAAAAAGCTTGGGGTTGCCTTATTTGAGTGCCTACTTGGACTCAGTAGGCTCAAACTTCAGTAACGGGGCCAATTTTGCTACAGCTGGATCCACCATTAGACCTCAAAATACAACAAAGTCTCAAAGTGGATACAGTCCCATATCCCTAGATGTTCAACTTGTACAATACTCTGATTTCAAAACAAGATCAATACGTGTTCGCAAAAAAGGAGGGGTGTTTAAGAAATTGTTACCCAAGGAGGAGTATTTTTCTAAGGCTTTATACACTTTTGATATTGGTCAAAACGATCTCACTGCTGGCTACAAACTCAACATGACAACGGAACAAGTGAAAGCATATATACCTGATGTATTAGGCCAGTTCTCTAATGTCATAAAGAGTGTATACGGAAAAGGTGGAAGATCTTTTTGGATACACAATACGGGCCCATTGGGCTGCCTACCATACATGTTGGATCGCTATCCTATGAGTGCGGCCCAAATAGATAAGTTTGGGTGTGCCAAACCGTTCAACGAGGTGGCCCAGTTTTTTAACCACAAACTGGAAGAAGCTGTTGTGGAATTGAGGAAAGAGCTTATAGAGGCCACAATCGTGTATGTTGATGTGTACACAGTGAAATACACCCTCATTAGTCATGCCCAAAAATACGGTTTTGAGAAGGGTGTGATTGCATGCTGTGGAGATGGTGGGAAGTACAACTTCAATAATGTAGCAAGATGTGGAGCTACTAAGAGGGTGAATGGCAAAAATATTGTAATAGCTAAATCATGTGAAGATCCAAGTGTGATGATTATTTGGGATGGAATTCATTACACTGAAGCTGCTAATAAGTGGATTTTCCTACAAATAGCCAATGGATACTTTTCAGATCCACCTATCTCTTTAAAATTGACTTGCCTTGCCAATGAATCCATCCACCACCATTAA 1191 0.4148 MEAMGEKWGKVILWVVISTTIIAIAMVPTVTCAKQCSFPAIFNFGDSNSDTGAISAAFGQAPPPNGITFFHTPAGRFSDGRLIIDFIAKSLGLPYLSAYLDSVGSNFSNGANFATAGSTIRPQNTTKSQSGYSPISLDVQLVQYSDFKTRSIRVRKKGGVFKKLLPKEEYFSKALYTFDIGQNDLTAGYKLNMTTEQVKAYIPDVLGQFSNVIKSVYGKGGRSFWIHNTGPLGCLPYMLDRYPMSAAQIDKFGCAKPFNEVAQFFNHKLEEAVVELRKELIEATIVYVDVYTVKYTLISHAQKYGFEKGVIACCGDGGKYNFNNVARCGATKRVNGKNIVIAKSCEDPSVMIIWDGIHYTEAANKWIFLQIANGYFSDPPISLKLTCLANESIHHH 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00840 396 Coils Coil 266 286 - -
Car06g00840 396 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 29 387 - -
Car06g00840 396 Pfam GDSL-like Lipase/Acylhydrolase 41 369 IPR001087 GO:0016788
Car06g00840 396 Gene3D SGNH hydrolase 28 375 IPR036514 -
Car06g00840 396 PANTHER BNAA06G32900D PROTEIN 29 387 - -
Car06g00840 396 CDD SGNH_plant_lipase_like 39 375 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00840 Car-Chr6 8261788 8263882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00840 39 378 Acyl Lipid Metabolism Gene Families AT4G10950 29.261 8.98e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00840 - - gmx:100803899 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00840 06 8261788 8263882 Car06g00840 06 8261788 8263882 ECH