Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00839 ATGGTGCTTCTACTCTCTTCAATCAacactcacactcacactcacactatcccactcactttcaccttcaaaccccaccgtcaccctcGCCACCCCTCTTGTTTCCTCCAAACCATCAACGCCAACCCTAACTCCGATTCCGATGACGACCCCCGCAACAACTTCACcactctcaccctcacttccacccgcgccctcgccTCCGCCATTCGTAAAGTCTCCACCTCACCCGTTGAGTTCACTCAGCGACTCGAGAAACATCGCTCAACCGGACTCGTTCTTCCTAGCCCTGACTTCCATACACTCTGCCTTCAACAGCTTCAGCTTTTTCGCAGAATCGTCCCCGAAGCTCTCCTCTCGGTGTATGTTAGACCGGCAGGTAGTTATGTGATGGATCGATTGGAGCTGCGGAGGGTTGCATTGTACCCTGGAGGAGATGATGAGTCAGAGGCAGAAGGCATTCTCATTCTTGTCGGTCATTTTAATGTTCCAGCCGGCTTGCGAGCCGCCGAGACTGCTCTTTCCGAATTGCAAGTTAAGGTTGTCCCTGAATGTAAGGCTGTAGTTCTTCCCATGGTTAAACACCCATTTGTTGTTGGTTTCTTGGTTGCTGAGCTTCCACTGGTGGAGCTCGAAACTTGTGAGAAGGCTCAAAGTGATAGGTCCGATAATCATGTATCTGCGGAGGAAGTTTATTCACTTTCTCCATTTTTGGATTTGGATAAGAAGTCTTGGGAAGTTCAGAGGCTTCGGGTCAAGGATGAGCCGGTTGGTATGCGCAACTTCACGTCCGATCAAAGATCAAATGCTATCGACATTTCACAGTCTCTGGCTATGGCATATGTTATGGATCAGAAAGCAATGTTACTTCAGCAATCAACATGGCAAAATAATGTCAGGATGAGTAATCTGGTTGAGCAAATCCGTGGTCCACTTTCAAGTATTCAAACCTTGAGTAAAATTCTATCTACACAAACAAAGAAAAGCCAGATTTCATATGACATTGTTGAGGATATCTTGATGCTAGGTGATCGTCTGAGTGATGTTCTCCAACAACTCCAAGATGCTGTTTATTTGACAAAAGCTAATATTATGCGCTACAATGAAGAAGCAATCAAGAAAATGAATGGTTCTAATCACATACTTGCTGAGTCAGAAAAAACTCAATTGCTAGATAGTTCCTCAAGGGATGGCTCTGCAAATAAAATGAATGAAACTGGTGTTGAGCCATTTTCTCTTAGCACTACTGCCCAGGATATAGAGATGCCCCTACCACCTTTAGCTCTCGCTCCACAACGACACGGAATCAGACCGTGCAATGTTTCTGAAGTATTGGCAGACTTGGTTGATACAATCAGACCTCTTGCTCAGAATCAAAAACGTGTAATAGAACTAAATCAATTCTCATCACCTTTGCTAGCTGCTGTAGAAGAACCTGCTTTGCGCCAGGCTTTCAGCAACCTTATTGAAGGTGCTTTACTGCGTACACGTGTTGGAGGAAAGGTTGGAATTGTGTCTACTGCTGCACCAGCTGGCGGTTCCCTCGTACTTATTGATGATGATGGGCCTGATATGCACTATATGACGCAAATGCATTCACTCGCACCGTATGGACAAGAACTCTTAGCTGAAGATATGGTTGAAGACAATATGACATGGAACTTTGTTGCTGGGCTTACTATTGCTCGTGAGATACTGGAGAGTTATGGTTGTGTTGTGCGCATTATATCACCTCGGATCAAAGATGCTCCGCTTGGAACTGGGGGAACTCTTATAGAACTTTGGCTTCCTATGGAAGTTGTTAAATCTGATGAAAAATTTAAATTTCTGCCTGCATTCTCTTTTTCCCAACTTTATTTCACAAGTAGTAGAATTGAAGAGCACAAGAAGAATGTTCCTCCAAAATTAGTACATAACCGTCACTTTCGTAGTGTTTTTAAAGAGAAGATTCCACACGATAATCGCTTATTCATTGTTTTTCACATCTTGCGGCGTGCTATTAGGTCTATTCCAGGGCTTGTTTTCTTAAAACAAGCATCTTTGCGTGGATATGTTGCACTTGCTAAATATAGAAAACCAAGTGAAAGTATGAGGCTTATTTTGACAACATTTGTTGGAATAATTTTTGGCTTCTTTATAGGGATATCATATCCAACATTAACTACAAAGTTGAATATCTCATCCAGTCTTCTTCCCTCCATTGACGTGTCTTCCATTGAAGATGAATATGCAAGTACCAATGCTCGGTCTTTTATGAAGAATAATGGCAGCAGCTCATCCAAACATCTGTTATTAAATGACACGTTGAAGATTTGGGTTCCATCAAGCCCAAGAGGTGCAGAAAGATTACCTCCGGCGATAATTGAAGCTGAGTCAGACTTTTATTTGCGTAGATTGTGGGGTGAGCCAAGTGAGGATTTAACCTCAAAGCCGAAATACCTCGTGACCTTCACTGTCGGTTATGATCAGAAAAATAATATTGATGCAGCTGTGAAAAAGTTTTCAGGGAATTTCACTATACTTCTGTTTCATTATGATGGCCGAACAACTGAATGGGATGAGTTTGAATGGTCTAAGCAAGCTATTCATGTGAGTGCTCGCAAACAGACAAAATGGTGGTATGCTAAACGGTTTCTGCATCCTGACATTGTGGCACCTTATGACTATATTTTTATATGGGATGAAGATCTTGGTGTTGAGCATTTTAATGCAGAGGAATACTTAAAATTGGTGAGGAAGCATGGATTGGAGATTTCACAGCCTGGTTTGGAACCTAATAATGGGCTGACATGGCAAATGACAAAGAGGAGAGGTGATCGTGAAGTTCACAAAGAAACAGAAGAAAAACCAGGATGGTGTAGTGACCCTCATCTGCCTCCTTGTGCAGCGTTTGTTGAGATTATGGCTCCAGTGTTTTCACGTGATGCATGGCGTTGTGTGTGGCATATGATCCAGAATGACTTGGTCCATGGATGGGGTCTTGACTTTGCTCTTAGAAAATGTGTGGAGCCGGCCTATGAGAAGATAGGAGTTGTTGATTCTCAGTGGATTATTCATCAAAGTATTCCCTCACTAGGGAATCAGGGAGAATCAAAATCTGGAACAGCGCCATGGCAGGGGGTGAGGGAGAGGTGTAGAAAGGAGTGGACAATGTTCCAGAGTCGAATGGCGAGCGCAGAAAATGCATACTACAAGGCTGTGGGAATCGATTTGTTTAATTCAACTGATCCTTAG 3234 0.4159 MVLLLSSINTHTHTHTIPLTFTFKPHRHPRHPSCFLQTINANPNSDSDDDPRNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDEKFKFLPAFSFSQLYFTSSRIEEHKKNVPPKLVHNRHFRSVFKEKIPHDNRLFIVFHILRRAIRSIPGLVFLKQASLRGYVALAKYRKPSESMRLILTTFVGIIFGFFIGISYPTLTTKLNISSSLLPSIDVSSIEDEYASTNARSFMKNNGSSSSKHLLLNDTLKIWVPSSPRGAERLPPAIIEAESDFYLRRLWGEPSEDLTSKPKYLVTFTVGYDQKNNIDAAVKKFSGNFTILLFHYDGRTTEWDEFEWSKQAIHVSARKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYLKLVRKHGLEISQPGLEPNNGLTWQMTKRRGDREVHKETEEKPGWCSDPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAYEKIGVVDSQWIIHQSIPSLGNQGESKSGTAPWQGVRERCRKEWTMFQSRMASAENAYYKAVGIDLFNSTDP 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00839 1077 CDD HATPase 481 596 - -
Car06g00839 1077 Pfam Protein of unknown function (DUF707) 776 1061 IPR007877 -
Car06g00839 1077 Gene3D - 427 581 IPR036890 -
Car06g00839 1077 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 436 598 IPR036890 -
Car06g00839 1077 PANTHER CHLOROPLAST SENSOR KINASE, CHLOROPLASTIC 32 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00839 Car-Chr6 8243260 8259463 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00839 - - gmx:100792515 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00839 06 8243260 8259463 Car06g00839 06 8243260 8259463 ECH