Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00685 ATGGATTCGAGTTCGGGGCAGCAAGAATTCGACTATTTGTTCAAGTTGTTAATGATTGGAGACTCTGGTGTTGGAAAAAGTAGTTTTCTTCTCAGATTCACCTCCGATGATTTCGAAGATCTCTCCCCCACCATTGGTGTTGATTTTAAGGTCAAATATGTCATGATGGGGGGTAAAAAACTCAAGCTTGCCATTTGGGATACCGCTGGTCAGGAGAGATTTAGAACACTCACAAGTTCGTACTATCGAGGAGCACAAGGAATCATCATGGTTTATGATGTAACACGGAGAGAAACATTTACAAATCTCTCTGAAGTATGGGCAAAGGAAATAGACCTTTATTCAACAAATCAAGACTGCGTGAAGATGCTTGTTGGAAACAAAGTAGATAAGGAGGGTGATAGAGTTGTGACAAAGAAAGAGGGAATGGACTTCGCTAGGGAATATGGTTGCCTCTTTATTGAATGCAGTGCTAAAACTCGAGTAAATGTGCAGCAATGCTTTGAAGAGCTTGTTTTGAAGACTCTTGATACACCTAGCCTCTTAGCTGAGGGCTCTAAGGGAGTAAAAAATAACATTTTTAAGGACAAGCCACCTCAGTCTGATGCATCCACAGGTGGTTGTTGCTGA 630 0.4143 MDSSSGQQEFDYLFKLLMIGDSGVGKSSFLLRFTSDDFEDLSPTIGVDFKVKYVMMGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDCVKMLVGNKVDKEGDRVVTKKEGMDFAREYGCLFIECSAKTRVNVQQCFEELVLKTLDTPSLLAEGSKGVKNNIFKDKPPQSDASTGGCC 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00685 209 SMART rab_sub_5 14 178 - -
Car06g00685 209 SMART ran_sub_2 19 204 - -
Car06g00685 209 CDD Rab18 14 174 - -
Car06g00685 209 SMART ras_sub_4 11 178 - -
Car06g00685 209 ProSiteProfiles small GTPase Rho family profile. 7 176 - -
Car06g00685 209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 178 IPR027417 -
Car06g00685 209 ProSiteProfiles small GTPase Ras family profile. 6 209 IPR001806 GO:0003924|GO:0005525
Car06g00685 209 PANTHER DRAB5-RELATED 1 209 - -
Car06g00685 209 PRINTS Transforming protein P21 ras signature 14 35 - -
Car06g00685 209 PRINTS Transforming protein P21 ras signature 36 52 - -
Car06g00685 209 PRINTS Transforming protein P21 ras signature 54 76 - -
Car06g00685 209 PRINTS Transforming protein P21 ras signature 118 131 - -
Car06g00685 209 PRINTS Transforming protein P21 ras signature 153 175 - -
Car06g00685 209 SMART rho_sub_3 16 178 IPR001806 GO:0003924|GO:0005525
Car06g00685 209 Pfam Ras family 15 174 IPR001806 GO:0003924|GO:0005525
Car06g00685 209 PANTHER SMALL MONOMERIC GTPASE-RELATED 1 209 - -
Car06g00685 209 SMART arf_sub_2 1 179 - -
Car06g00685 209 Gene3D - 7 209 IPR027417 -
Car06g00685 209 TIGRFAM small_GTP: small GTP-binding protein domain 12 170 IPR005225 GO:0005525
Car06g00685 209 ProSiteProfiles small GTPase Rab1 family profile. 9 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00685 Car-Chr6 6862327 6865837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00685 15 168 EF-hand Containing Proteins AT5G27540 25.000 2.21e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00685 K07910 - gmx:100526880 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00685 06 6862327 6865837 Car05g02506 05 70145564 70150922 PCT