Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00601 ATGGGGCACAGAGAAAAATCAAAAGACCGAAAAGATAAGAGATTGCAAGAGATATCACTTTTGAGGACCATTCCTTATTCTGATCACCAAAGGTGGTGGTCTAAGGAAACAATTGCTGTGGTCACTGGTGGAAATAGAGGAATTGGATTTGAAATTTCTAGACAACTTGCTGATCATGGAGTAACTGTAATACTAACATCAAGAGATGCTAATGTTGGTGTTGAATCAATTAAGGTTTTGCAAGAAGGTGGTCTTGATGTGGAATGTCATCAACTTGATGTATTAGATTCTTCATCCATTAGCCAATTCTCTGAATGGTTAAAGGAAAATTATGGTGGCTTAAATATTCTGGTGAACAATGCAGGTGTGAATTTCAATTTTGGGTCAGATAATTCTGTTGAAAATGCTCAACAGGTTATTGAAACAAATTATTATGGAACCAAACGTATGATTGAAGCTATGATTCCATTGATGAAGGCATCTACCGCTGGTGGCCGAATTGTAAATGTGAGCTCACGTCTAGGTCGACTAAATGGAAAACGAAACAGATTGGAGAATGATGCTCTGAGAGAGCAACTAAGTGATGTGAAAAACCTTACAGAGGAACTAATTGATGGTGTTGTGACAAATTTTCTACAACAAGTAGAAGATGGAACATGGAAATCAGGAGGATGGCCTCGAAGATTTACGGATTATTCGGTGTCGAAACTAGCTGTTAATGCTTATACAAGGTTTATGGCAAAGAAACTTTGTGATAGAGTTGATGGTGAAAAGATTTTTATTAATTGTTATTGTCCTGGTTGGGTGAAAACAGCTCTTACAGGTTATGCAGGAAGTGTTACAGTTGAGGAAGGTGCTGATACTGGAGTTTGGCTTTCTCTTATTCCTGAACAAGCAATTACAGGGAAGTTTTTTGCAGAGAGAAGAGAAATTCATTTTTAA 942 0.3737 MGHREKSKDRKDKRLQEISLLRTIPYSDHQRWWSKETIAVVTGGNRGIGFEISRQLADHGVTVILTSRDANVGVESIKVLQEGGLDVECHQLDVLDSSSISQFSEWLKENYGGLNILVNNAGVNFNFGSDNSVENAQQVIETNYYGTKRMIEAMIPLMKASTAGGRIVNVSSRLGRLNGKRNRLENDALREQLSDVKNLTEELIDGVVTNFLQQVEDGTWKSGGWPRRFTDYSVSKLAVNAYTRFMAKKLCDRVDGEKIFINCYCPGWVKTALTGYAGSVTVEEGADTGVWLSLIPEQAITGKFFAERREIHF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00601 313 CDD carb_red_PTCR-like_SDR_c 38 313 IPR045313 GO:0016616
Car06g00601 313 Gene3D - 29 313 - -
Car06g00601 313 PRINTS Glucose/ribitol dehydrogenase family signature 38 55 IPR002347 -
Car06g00601 313 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Car06g00601 313 PRINTS Glucose/ribitol dehydrogenase family signature 232 251 IPR002347 -
Car06g00601 313 PRINTS Glucose/ribitol dehydrogenase family signature 257 274 IPR002347 -
Car06g00601 313 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 25 313 - -
Car06g00601 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 305 IPR036291 -
Car06g00601 313 PANTHER (+)-NEOMENTHOL DEHYDROGENASE-RELATED 25 313 - -
Car06g00601 313 Pfam short chain dehydrogenase 38 177 IPR002347 -
Car06g00601 313 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Car06g00601 313 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 173 IPR002347 -
Car06g00601 313 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 232 251 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00601 Car-Chr6 6072534 6074304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00601 28 219 Miscellaneous Gene Families AT2G29150 28.505 2.39e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00601 K00079 - gmx:100793649 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00601 06 6072534 6074304 Car06g00601 06 6072534 6074304 ECH