Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00573 ATGCCGGAAGAGGATATGGTTGACATAAAGTTTAGGTTATACGATGGGTCTGATATTGGACCGTTCAGGTATTCATCTGCTGCAACTGTTGATATGCTTAAGCAAAGGATTGTCTCTGATTGGCCTAAAGTAGGCAAAACGGTTCTCCCTAAGTCAGCAAATGAAGTGAAATTGATTAGCTCTGGTAAAATCTTGGAAAACAACAAGAATATTGGTCAGTGTAAAGCACCATTTGGTGATATTGCGGGGGGAGTTATAATCATGCATGTTGTTGTACAGCCATCTCTAGCAAAATCTAAAGCTGAAAAGAAGATTGATGATTCACCCAAGAAGGTTGTGTGTTCTTGTTCAATATTGTGA 360 0.3917 MPEEDMVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPKVGKTVLPKSANEVKLISSGKILENNKNIGQCKAPFGDIAGGVIIMHVVVQPSLAKSKAEKKIDDSPKKVVCSCSIL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00573 119 CDD Ubl_MUBs_plant 6 94 - -
Car06g00573 119 Gene3D - 1 101 - -
Car06g00573 119 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 1 119 - -
Car06g00573 119 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 119 IPR040015 -
Car06g00573 119 Pfam Ubiquitin-2 like Rad60 SUMO-like 5 117 IPR039540 -
Car06g00573 119 SUPERFAMILY Ubiquitin-like 2 98 IPR029071 -
Car06g00573 119 ProSiteProfiles Ubiquitin domain profile. 7 74 IPR000626 GO:0005515
Car06g00573 119 PIRSF MUB 1 119 IPR017000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00573 Car-Chr6 5766461 5771969 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00573 - - gmx:100810070 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00573 06 5766461 5771969 Car06g00573 06 5766461 5771969 ECH