Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00572 ATGGATGTTCGCGTGAAAGAAGAAGCATTGGAAATTCGTAATGTTTCTCTCGAACAACGAAGGCAAAGAAATAACTTCGTTTCGAACGTTCCTCCTCATCCTGACTCGGTTATTGAACTCAGTAGTAGcgattccgaatccgattccgaatccgatgctgattTGGATACGGTAGTTGCTTCCGCTAAAAGAAAGGTTAACGAGAAGGGAGGGTTTTTGCCCATTGGATTTCTAAGTCCTCTTCCTCCACAACAACCGTCGTCGTCGGATGCTGTTTTGTATCTTCCGGCGCCGGAGTGGGCTTCCAATACTACGCCTAACCGTTTCAATAAGAGTGTTAACTTTACACTTCAAGGTTGTAAGCAGTTTTGGAAAGCCGGAGATTACGATGGTCCTCCTGCACGTGCCTTCGAAACTTCAACCGTTGGTATGGATCATGTCAGGGTTCACCCCAAGTTTCTACATTCTAATGCCACAAGTCATAAGTGGGCTCTTGGAGCTTTTGCTGAGCTTTTGGACAACGCATTGGATGAGGTTTGTAATGGTGCCACATATGTAAATGTAGATATGCTTGTGAGTAAGAAAGATGGCTCCAGGATGTTGCTAGTAGAAGATAACGGTGGTGGGATGGATCCTGATAAAATACGTCAATGCATGTCGCTGGGATATTCCGTGAAAAGCAAGATAGCAAATACCATTGGACAATATGGAAATGGCTTTAAAACTAGTACCATGAGGCTCGGAGCTGATGTAATTGTGTTCTCCCGTTGTCAAGGGAAAGATGGGAAGAGGTCTACACAGAGCATAGGCTTGCTGTCTTATACATTTTTGAGGAATACACGGAAGGAGGACATTGTAGTGCCCATGCTGGACTATGAAAGAGATGGACAGGGATGGAATAAAATGTTACGAACCTCTCTGGATGACTGGAATAATAATGTTGAAACAATAGTCCAATGGTCACCATTTTCTGATGAGGCCGATCTTCGTCGTCAGTTCAACCTGTTGAAAGATCAAGGTACACGGGTAATTATATACAATCTCTGGGAAGATGACCAAGGTCAGCTGGAACTTGATTTTGATGAAGATCCAAATGATATTCAAATAAGAGGAGTAAATCGAGATGAGAAACACATAAAGATGGCTAAAGATTTTCCCAACTCTACACACTTCTTAACTTATCGACATTCACTGAGGAGTTATGCTTCAATTTTATATCTGAGGTTTCCTCGAGGTTTCCGAATTATTCTTCGTGGGAAAGATGTTTTGCATCACAATATAGTCAATGATATGATGATGTCTCAGGAAGTGACGTACAGGCCTCAATCTGGAGTTGCTGATGGGATTCTAAAGGATTCAAATATGGTTGCTATTGTTACTATCGGATTTGTCAAGGATGCAGTGCATCATATTGATGTTTCAGGGTTTAACGTTTATCATAAGAACCGACTCATTAAGCCATTCTGGAGGATCTGGAATCCAGCAGGAAGTGGTGGGCGTGGGGTCATAGGTGTATTGGAAGCCAACTTTGTTGAACCTGCTCATGACAAGCAAGGCTTTGAACGTACATTAGTTTTATCAAGACTGGAGCAACGGCTGATACAAATGCAGAAGAgttattgGGGAAGTAACTGCCATAAAATTGGCTATGCTTCAAATCGAATTAAAAAACATATCAGTAGTTCTGCTGGTAAAGATGCATCACCGGATCCTGTTCCAGAATCATCTCAATCAAAAAGGAAATATTCTGCCACAAATGGCAAGGCAACTCCATTGGCATCGGATGAACTGAATTCACACAGTAAACAAAAAAGGATACGAAAAGAAACCGAAAGATATGTTGAATACACAAATGGTAGAGACCAAAGTTCATCCGAACAATCATCATATGCTGATGATGACAGTGATCAAAATGATGATGTCTTGCCAAAGAACCAAACAAAGGGTGATAGTCGAAAGACACGTATTTTTGAAAAGTCATTTGGAAATAAGAATGTAAGTTTTCAGGATTCTACATCAAGGGAAAAAGCCTTGCGGTCTAAACAAGGATCTATGCAAGAGGCAAAAGATGTTAATGATTGTGAGCAACCACTATCTGATTCATCGTCTCTAGAACAGTTGAGAAAAGAAAATCGCGAGTTGAAGGAGAGATTAGAGAAGAGAGAGGAAGAAATATTAGGGGAAGTATTGCAAGCTTTACGGGATGAGAAAGATAAGTGCAAATCTGTTGAAACTCGGCTACGTGATGCAGAACAAAAGATTGAAGAAATGAACAAGGAACAAGAAACTCTCATTGATGTGTTCTCTGAAGAAAGGGATAGACGTAATGCTGAAGAAAAAAATTTGAGAAAGAAGCTTCAGGAAGCATCAAATACCATCCAAGAGCTGCTTGAGAAGGTTCGATTGCTTGAAAGGAAGTCTTCAAGCGGCAAATTAGAACGATGA 2445 0.402 MDVRVKEEALEIRNVSLEQRRQRNNFVSNVPPHPDSVIELSSSDSESDSESDADLDTVVASAKRKVNEKGGFLPIGFLSPLPPQQPSSSDAVLYLPAPEWASNTTPNRFNKSVNFTLQGCKQFWKAGDYDGPPARAFETSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNALDEVCNGATYVNVDMLVSKKDGSRMLLVEDNGGGMDPDKIRQCMSLGYSVKSKIANTIGQYGNGFKTSTMRLGADVIVFSRCQGKDGKRSTQSIGLLSYTFLRNTRKEDIVVPMLDYERDGQGWNKMLRTSLDDWNNNVETIVQWSPFSDEADLRRQFNLLKDQGTRVIIYNLWEDDQGQLELDFDEDPNDIQIRGVNRDEKHIKMAKDFPNSTHFLTYRHSLRSYASILYLRFPRGFRIILRGKDVLHHNIVNDMMMSQEVTYRPQSGVADGILKDSNMVAIVTIGFVKDAVHHIDVSGFNVYHKNRLIKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLEQRLIQMQKSYWGSNCHKIGYASNRIKKHISSSAGKDASPDPVPESSQSKRKYSATNGKATPLASDELNSHSKQKRIRKETERYVEYTNGRDQSSSEQSSYADDDSDQNDDVLPKNQTKGDSRKTRIFEKSFGNKNVSFQDSTSREKALRSKQGSMQEAKDVNDCEQPLSDSSSLEQLRKENRELKERLEKREEEILGEVLQALRDEKDKCKSVETRLRDAEQKIEEMNKEQETLIDVFSEERDRRNAEEKNLRKKLQEASNTIQELLEKVRLLERKSSSGKLER 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00572 814 MobiDBLite consensus disorder prediction 571 597 - -
Car06g00572 814 MobiDBLite consensus disorder prediction 21 55 - -
Car06g00572 814 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 166 359 IPR036890 -
Car06g00572 814 MobiDBLite consensus disorder prediction 559 708 - -
Car06g00572 814 MobiDBLite consensus disorder prediction 598 616 - -
Car06g00572 814 MobiDBLite consensus disorder prediction 689 704 - -
Car06g00572 814 MobiDBLite consensus disorder prediction 637 659 - -
Car06g00572 814 Pfam Morc6 ribosomal protein S5 domain 2-like 396 541 IPR041006 -
Car06g00572 814 PANTHER PROTEIN MICRORCHIDIA 7 1 799 - -
Car06g00572 814 Gene3D - 150 348 IPR036890 -
Car06g00572 814 Coils Coil 701 724 - -
Car06g00572 814 MobiDBLite consensus disorder prediction 617 631 - -
Car06g00572 814 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 1 799 IPR045261 GO:0016887
Car06g00572 814 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 166 266 - -
Car06g00572 814 MobiDBLite consensus disorder prediction 674 688 - -
Car06g00572 814 MobiDBLite consensus disorder prediction 21 44 - -
Car06g00572 814 Coils Coil 733 767 - -
Car06g00572 814 Coils Coil 772 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00572 Car-Chr6 5749643 5761960 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00572 - - gmx:100786679 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00572 06 5749643 5761960 Car06g00572 06 5749643 5761960 ECH