Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00569 ATGCACATTCGCCGTCTCAGACTCgacgacgaacaagaagaagaagatgaaCTTCAGCCTCAGCCACAACCTCACAACTCTACCAATTTTCCCTCGGAGCCACTTGTTATCTCCGACGACGACTTCGTCGACGTCTCCGATGACTTCTTCcctccaactccaccaccgcctccgcctgttcctgaacctcAAGCTTCGGATTCTCCCGTCAACGATTTTCTTCGCCGCACGGGATTGTGCTTGAAGAGAATCTGGCTTACTGATTGTCTTCGCGAACTAGGGGTTTCAGTGAGGGGCTTCGAAGGTTTCGATGTCGCCACAAAAGCTAAACTCTGCTTCGAGCAGTTTTTGTTTTCTGATTTCAACTTCTGTGGTAGCGGCGTTCTTCCTCCTAATGTTGATTCCATGCATCTCGCTGTTCTCCCTGGTCCTTACGTATTGCAGGTTGATGAAATTGTCAATATCACTTGTCCTCTACGAGGCAGATATGAAAAAGCTCCTCAGGGGCTTAAAAGGTGCCTGAAGTTGTCAATGACTGATGGTATTCAGAGAGTCTTTGGGATGGAGTACAGGCCTATTCAAGCTCTTGAAGTTTGTGCGTCTTCTGGTTTAAAGGTCGCTATCTCTAATATACATGTGCGTCGTGGACTTATGATGCTGGTCCCTGAAACCATTGAAGTATTGGGGGGATTAGTCGAGCAGCTGGATGCAGCAAGAAAGAGGCTGGTTGATGAACTAAATAAGCCACCTAGGGGAAATAGAACCAGAAATGGAGTGCTTCCTCCTTTAGCAACCCGAGCGGCTCTTGCGGCATGGCCTTCAGGTGGAGTTGATGATCTCAGGCACAGTGGCTCGACGCTGCACAATACTGATACTGCGCAGGCAAACAACCAAGACACTTCTTTGCTTATAGGTGCACAAAATGCTACTTCCAATTCAGTACCTCACATGGTTCCAAATGTGGAGCCAATGAATATTGATATACAGCGGGGTACTGATCCCGTGTTCAATGATAGTTCAACAGCTAATCAGTCTTCTTCAATGGCTGATGAGATGCATATAGATACTGCTAATATTACAATGGAAAATTCTGTTAGCAACCGATCTTCTCACATGCACTCAAATGTTGCTGCGGCATACGGAAACACTGTTCATGTAATGAGAGAAGGTCCTGTGCCTATTGAATGTTTTCCTGTTTCTGAAAATGTTGAGACATACAGGAATAGATCTTCTTCAATGGCTGATGAGATGCATATAGATACTGCTAATATTACAATGGAAAATTCTGTTAGCAACCGATCTTCTCACATGCACTCAAATGTTGCTGCGGCATACGGAAACACTGTTCATGTAATGAGAGAAGGTCCTGTGCCTATTGAATGTTTTCCTGTTTCTGAAAATGTTGAGACATACAGGAATAGAGTTCCTGAAAATGCTCCTTGGAACAGATCCTCCTCCACTGCATTTAACAATGAAGATATCTTGACTGTTGACACCAGTGACAATCCACTCATACCGTCTGGAGACCAAGAAGTTCCTTTTACATACTTAGCTAGTTTGTCAGCCAAGTGGGTTGCAATGAAGGAGACAGCTCCTCTGGTTCGGGGTAAAATTAAGTGCTTTCTGACCGGTGTTAAAAGGTTCCAGtataagaaaaggacaacatacgagcttcaggcatatgtagatgatggtagccttatttctgaaatcctcattcatcatgatGTTGTACAGAAAGGAATTGGTTATTCTCCTGTGGAGGTCACTGCAGCTCTTTCTTCTTCTGACACAAAAATAGTCCTGAACATGAAGGAGACTATGCATAAATTCCAAGCTTTTTTAGCAGACTTTGAGGGAGTAATACTTGTGGAATTAAATCGAAAATGTTCCCTTCCAACTGCCTTAGACATGAGTCAAGGCTGTCCTCAATCTGATGCGTGGTCACTTCTGAGAAGGCTTAAGTCTCTTCCCTCTGCACAAGCTCAAAACCATTTCCCTTCAGACACAATTGTTTTATCCCCATAA 2028 0.4098 MHIRRLRLDDEQEEEDELQPQPQPHNSTNFPSEPLVISDDDFVDVSDDFFPPTPPPPPPVPEPQASDSPVNDFLRRTGLCLKRIWLTDCLRELGVSVRGFEGFDVATKAKLCFEQFLFSDFNFCGSGVLPPNVDSMHLAVLPGPYVLQVDEIVNITCPLRGRYEKAPQGLKRCLKLSMTDGIQRVFGMEYRPIQALEVCASSGLKVAISNIHVRRGLMMLVPETIEVLGGLVEQLDAARKRLVDELNKPPRGNRTRNGVLPPLATRAALAAWPSGGVDDLRHSGSTLHNTDTAQANNQDTSLLIGAQNATSNSVPHMVPNVEPMNIDIQRGTDPVFNDSSTANQSSSMADEMHIDTANITMENSVSNRSSHMHSNVAAAYGNTVHVMREGPVPIECFPVSENVETYRNRSSSMADEMHIDTANITMENSVSNRSSHMHSNVAAAYGNTVHVMREGPVPIECFPVSENVETYRNRVPENAPWNRSSSTAFNNEDILTVDTSDNPLIPSGDQEVPFTYLASLSAKWVAMKETAPLVRGKIKCFLTGVKRFQYKKRTTYELQAYVDDGSLISEILIHHDVVQKGIGYSPVEVTAALSSSDTKIVLNMKETMHKFQAFLADFEGVILVELNRKCSLPTALDMSQGCPQSDAWSLLRRLKSLPSAQAQNHFPSDTIVLSP 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00569 675 SMART DUF1767_2 71 164 IPR033472 -
Car06g00569 675 MobiDBLite consensus disorder prediction 1 68 - -
Car06g00569 675 Pfam RecQ mediated genome instability protein 76 241 IPR013894 -
Car06g00569 675 Gene3D - 120 246 IPR042470 -
Car06g00569 675 MobiDBLite consensus disorder prediction 49 65 - -
Car06g00569 675 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 513 654 IPR032199 GO:0000166
Car06g00569 675 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 65 658 - -
Car06g00569 675 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 65 658 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00569 K10990 - gmx:100803734 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00569 06 5713295 5719579 Car06g00569 06 5713295 5719579 ECH