Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00567 ATGGACCTTATTCATAAGTTCCTCAACATAGTAGCTCCTCCATTCACCTTCTTTTCCTTAGCTCTTTTCTTACCACCTTATTGGGCAATCAAATTCTTCCTTTCCACTATATATTACATCTTCACTGAAAATGTTGCTGGTAAAGTTGTTCATATCACTGGTGCTTCCTCTGGTATTGGAGAGCATTTGGCGTACGAGTATGCAAAGAGAGGAGCTCTATTAGCACTTTCTGCTAGAAGAGAGACTGCGTTGCGTGAAGTTGCTGATAGAGCGCGTGATTATGGATCTCCTGATGTTATTATAATACGTGCAGATGTTTCTAAGGTTGAAGATTGTTTACGATTGATTGATGAAACTGTTCAACATTTTGGAAGATTGGATCATCTAGTAAACAATGCTGCAATTAGTGCTGCCACTTTGTTTGAAGAAGTAACTGATATCACCGATTTGAGACCTGTCATGGATACAAATTTTTGGGGATCAGTTTACACAACCCGTTTTGCTTTACCACACCTGAGAAACAGCAGAGGCAAAATTGTGGTACTGTCATCTGCTGATTCTTGGATGCCAGCACCTAGAAGGAGTATCTATAATGCAAGTAAAGCAGCATTAGTGAGTCTTTATGAAACATTGAGAGTGGAAGTTGGATCAGACATAGGTATAACAATTGTGACACCCGGTTATATAGAATCTGAATTGACCAAAGGGAAGTTCTTATTGCCACCACAAGCCAAGATGGGCGTCGACCAAGATATGAGAGATGTTGAAGTGAGCGCAATGCCAGTGGGATCAGTGAGTGGATGCGCCAAATCAATAGTGAACAGCACATTGAGAGGAGACAGATATTTAACAGTACCAGCTTGGTTCAGAATGACATATGTTGTCAAAGTCTTGTGTCCAGAATTGGTGGAATGGAGTTTCAGAATGTTGTATCTTACTAAATCAAATACTACTCCATCTGATCTCAACATCAGTCAAGACCCTGTCTTGTATTCTCCCCACGAAATCAACACCGGCGGCCTCACTTTCATCGCCAAAGTTTTTGGAATTGCAGCTTCTTTAATGGACAACAACAACAACTTTGTTCCTTCCTACGCTCGCGCCACTCCAAGTTCTGGCAATGGCAGAGGAAGGGCTTTTGATACGAGAAATGATAGAAAAAGAACAAGAGggtgtggtggtggtggtgggagtggCTCGGGAAAGGATAAAATTGATTCTCTTGGTAGGCTCCTGACGCGAATTTTACGGCATATGGCATCTGAATTGAATTTGAATATGAGGAGTGATGGTTATGTGAACGTTAATGATTTGCTAAAGCTGAATTTGAAGACATTTGCTAATATTCCTCTACGGTCCCACACTATTGATGACATTAGGGAGGCTGTTCGAAAAGATAATAAGCAACGTTTCAACCTCATAGAAGAAAACGGGGAGCTACTAATACGTGCAAACCAAGGCCACACAACAACGGCTGTTGAAACTGAAAGCTTATTGAAACCAATCCTTTCAGATGAAGGATTTCCAGTTTGTGTTCATGGAACGTATAGAAGGAACTTAGACTCAATTCTAGCATCTGGTCTGAAACGCATGAAGAGATTGCATGTTCATTTCTCTTGTGGTTTACCAACAGATGGAGAAGTAATAAGTGGTATGAGGAGAGATGTCAATGTTCTGATATTTCTTGATGTTAGAAAAGCATTGGTGGAAGGTTTTGAAGGTGTTGTTCCACACAAGTATTTCCAGAAGATAGAATCATGGCCTGGCAGAGAACCTATTCCTTTTTAA 1788 0.3993 MDLIHKFLNIVAPPFTFFSLALFLPPYWAIKFFLSTIYYIFTENVAGKVVHITGASSGIGEHLAYEYAKRGALLALSARRETALREVADRARDYGSPDVIIIRADVSKVEDCLRLIDETVQHFGRLDHLVNNAAISAATLFEEVTDITDLRPVMDTNFWGSVYTTRFALPHLRNSRGKIVVLSSADSWMPAPRRSIYNASKAALVSLYETLRVEVGSDIGITIVTPGYIESELTKGKFLLPPQAKMGVDQDMRDVEVSAMPVGSVSGCAKSIVNSTLRGDRYLTVPAWFRMTYVVKVLCPELVEWSFRMLYLTKSNTTPSDLNISQDPVLYSPHEINTGGLTFIAKVFGIAASLMDNNNNFVPSYARATPSSGNGRGRAFDTRNDRKRTRGCGGGGGSGSGKDKIDSLGRLLTRILRHMASELNLNMRSDGYVNVNDLLKLNLKTFANIPLRSHTIDDIREAVRKDNKQRFNLIEENGELLIRANQGHTTTAVETESLLKPILSDEGFPVCVHGTYRRNLDSILASGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLDVRKALVEGFEGVVPHKYFQKIESWPGREPIPF 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00567 595 Gene3D - 510 586 IPR042081 -
Car06g00567 595 PANTHER RETINOL DEHYDROGENASE-RELATED 1 321 - -
Car06g00567 595 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE 1B-LIKE ISOFORM X1 1 321 - -
Car06g00567 595 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 312 IPR036291 -
Car06g00567 595 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 197 216 IPR002347 -
Car06g00567 595 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 185 IPR002347 -
Car06g00567 595 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 135 IPR002347 -
Car06g00567 595 Gene3D - 39 317 - -
Car06g00567 595 Pfam RNA 2'-phosphotransferase, Tpt1 / KptA family 406 573 IPR002745 GO:0016740
Car06g00567 595 PRINTS Glucose/ribitol dehydrogenase family signature 197 216 IPR002347 -
Car06g00567 595 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Car06g00567 595 PRINTS Glucose/ribitol dehydrogenase family signature 124 135 IPR002347 -
Car06g00567 595 PRINTS Glucose/ribitol dehydrogenase family signature 217 234 IPR002347 -
Car06g00567 595 PRINTS Glucose/ribitol dehydrogenase family signature 171 187 IPR002347 -
Car06g00567 595 MobiDBLite consensus disorder prediction 366 403 - -
Car06g00567 595 SUPERFAMILY ADP-ribosylation 408 573 - -
Car06g00567 595 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 184 212 IPR020904 GO:0016491
Car06g00567 595 Pfam short chain dehydrogenase 48 236 IPR002347 -
Car06g00567 595 Gene3D - 404 484 IPR042080 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00567 Car-Chr6 5699412 5706768 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00567 43 263 Acyl Lipid Metabolism Gene Families AT1G24360 29.911 8.25e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00567 K22418 - egr:104416667 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00567 06 5699412 5706768 Car06g00567 06 5699412 5706768 ECH