Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00550 ATGGGAAAACCGAAAGTTAAAAAATCTGAAGAAACCAACAGACAGTTCGACAGTGACACGAAATGCAGTTCTAAACAGCAAACTGCAGAGAAAGGCAATGAATGGCCTGATTGGTTGCCTGATGGCTGGGATATGGAAGTCAGAACCCGAAAAAGTGGTCCGCTTATGGGATCTGGATATAAGTGTTACATTGATTCACTGAATGGAAACAAGTTCTACTCGAAACCTGAGGTATTACGATATCTTGAAACTACAAAGGGCAACAACTGCACTTCCAAGAAGAAGAAATTCACTAGAACACATTTTCCAAGCAAGGAGGGGGAGAAACACATTAACAAGCATTCTCCAAGCAAAGAGGAGGAGAAACGCACTAACAAGCATTCTCCAAGCAAGGAGGATGAGAAATGCACTAACAAGCATTCTACAAGCAAGGAGGAAGCTAAATGCAATGACAAGCATTCTCCAAATAAGGAGGAGGAGAAATGCACCAACAGTAGCCAGCATTCTCCAAACAAGGATGGAGAGAAATGCATTAACATGCACTCTCCAAGCAATGCTGTGGGTGAGAAGTCCACTGTGGaggatctaccgcttggatggattaaagaagtaaaaaTTCGGAAGAATGGAAATGGCATTAAGAAAGATTGGTTTTATACTGATCCAGTGAGTGGATATGTATTCCGTTCCAAGATGGATGTACTGCGTTATCTCGAATCTGGAGATATAGGCAAATGCGCCATTAAACCAAGTAGAAGTCAATATCAAGATGAAGACATCTTAACTCCCTCACCTGCTGCCAAGAGACAGAAACCGAAGCAGTCTACACCGTTGCAAAAGATTGTTGCCAAAGAACTAGTTGATAGAAGCAGCTTAGAATTGCCAGATGTTAACAACTCAAGGAAAGGGCGACATGTTAATGTGCCATCTGAAATTATGGTTGCTCGTAACACCTCAGGTGGATCTGTTGTAAAGATGCATTCGTTAGAGGATGGAGCTGCAAATTCTCCTGAAATGAAGAAAACATCTGAAGCAGTTTTGAAGTACGAATCCTTGAAGGTGAATCACAGTAACAATAGCATATCGAAAAACAATTTCAATGTGGGTCATCGGTTTTCACGGAGACTGGCTGGGATTGAACCTGTCAAGTTGGCTGACAATGTGATCAATGATCAGACTCTTCTATTTCCAAAAAGAAACTTGAGAAAAAATAGAACCACTCTAGGCACTGATATGGAAAATAAATCATCTCAGCATTTCAATGGTGTCACGAAAATTGAGCAGCCAGAGGCAATGAACACAGGCCAAACTATTTCTGAAGTAGTTTTCAAAGAACAACCACATCAACTAGAAAAAGATAAAACAGAAGGCAATAAGCCAGAAATTCATACCAACTCAAACAAATCCAGTAAGAAGAAAGAGCTCCTCATTCCTTGTCGGGCTTCAAAACGACTGGCTGGATCTGAACGTGGGCTGATGAACTCCATATTCTGTGAAAAAGCTTCCAAATATAAAAGCCAAAGGTCTAAAGAAGTCCCAGCTGAATTGCAGCAAAGTGAGGGTGGCCTGGTTACCGAGTGTACAGATCATGCACCAATAAATGGAGAGTCAGGAAATAAAAGAAGAAAATCTCCTAAAGTCCTTCCTGTTGCAGACAATCAACTGGAAAAACTTGAAGCAGATGACGAGAAATCAGAACCTCCGCTGTCCTTTGCATTCCACTACTCTTGGTCTGACCCATGCTTGGAATTTGCAATCAATACCCTCACAGGTGTGTTACCCCCAATTGAGAATTCTGTTGATAACAGATCCTCTACTGTCCTTGAAACTGATATTCAAAAACCTCCATTTGACAATTCCACTGGAAGCAGAGGCAGTCAAAACAATTCAGTTGATAATGGACCCACTACCATCCATGAAACTGATATCCAAAAAACATTGTTTGACAAGGTTACAGTTAAAAAGGACAGTCAAAACAATTCAACTGGCAATGTTACAAGAAGCAGGGACAAAAACCCACTCGTGCAGTCAAATAAATCCAAGAGAAAGAAAGAGGCCAAAGTCCCTATGCGGTTGTCAAAGCGACTTGCTGGCCTTGAACCAGAGGCAAGTCCATCTGATAAAGCTCTTGAGTATTCCAGTAGAAAATCATGCAAAGAAGAACCCAGTGCAAGTGCAACTGTACTTTTAACTAATGGAGCGTCTCACCATCTTTATGCTGGGGAAGAAACCAAGCTTACTCATAATGAGTCTGACAGTTTGAAACCAGAAGTGGTAGGAGAATCGTCAAGAAAGAGAAGTAAGTCATATGATGCCCAAACTGTTCCCAAGGAACAACATTTGGAGAAAGTTGAAGCTAAAAGTATTGGTGATGATAGATCAAAGCACCCCTTACCATTTGGGGAATCTTGGTCAGACCCCTGCCTAGAATTTGCATTCAAGACTCTCACTGGTGCTTTGCCAGTTGATTCTGCTGCACAGATTTTTAAAGTAACAACTCCTGATGTGAATGACCCGCCAAACAGTGAATTGCATGGGAGAGCGAAAACCAGCATTAATGGAAAAGCTCGTGACAACTCAAACCAATCCCAGAACAAGAAAGGGT 2605 0.4104 MGKPKVKKSEETNRQFDSDTKCSSKQQTAEKGNEWPDWLPDGWDMEVRTRKSGPLMGSGYKCYIDSLNGNKFYSKPEVLRYLETTKGNNCTSKKKKFTRTHFPSKEGEKHINKHSPSKEEEKRTNKHSPSKEDEKCTNKHSTSKEEAKCNDKHSPNKEEEKCTNSSQHSPNKDGEKCINMHSPSNAVGEKSTVEDLPLGWIKEVKIRKNGNGIKKDWFYTDPVSGYVFRSKMDVLRYLESGDIGKCAIKPSRSQYQDEDILTPSPAAKRQKPKQSTPLQKIVAKELVDRSSLELPDVNNSRKGRHVNVPSEIMVARNTSGGSVVKMHSLEDGAANSPEMKKTSEAVLKYESLKVNHSNNSISKNNFNVGHRFSRRLAGIEPVKLADNVINDQTLLFPKRNLRKNRTTLGTDMENKSSQHFNGVTKIEQPEAMNTGQTISEVVFKEQPHQLEKDKTEGNKPEIHTNSNKSSKKKELLIPCRASKRLAGSERGLMNSIFCEKASKYKSQRSKEVPAELQQSEGGLVTECTDHAPINGESGNKRRKSPKVLPVADNQLEKLEADDEKSEPPLSFAFHYSWSDPCLEFAINTLTGVLPPIENSVDNRSSTVLETDIQKPPFDNSTGSRGSQNNSVDNGPTTIHETDIQKTLFDKVTVKKDSQNNSTGNVTRSRDKNPLVQSNKSKRKKEAKVPMRLSKRLAGLEPEASPSDKALEYSSRKSCKEEPSASATVLLTNGASHHLYAGEETKLTHNESDSLKPEVVGESSRKRSKSYDAQTVPKEQHLEKVEAKSIGDDRSKHPLPFGESWSDPCLEFAFKTLTGALPVDSAAQIFKVTTPDVNDPPNSELHGRAKTSINGKARDNSNQSQNKKG 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00550 868 MobiDBLite consensus disorder prediction 254 278 - -
Car06g00550 868 PANTHER OS04G0193200 PROTEIN 3 594 - -
Car06g00550 868 PANTHER OS04G0193200 PROTEIN 651 853 - -
Car06g00550 868 Gene3D - 17 115 - -
Car06g00550 868 Gene3D - 151 285 - -
Car06g00550 868 MobiDBLite consensus disorder prediction 449 474 - -
Car06g00550 868 PANTHER OS04G0193200 PROTEIN 3 594 IPR038945 -
Car06g00550 868 PANTHER OS04G0193200 PROTEIN 530 599 IPR038945 -
Car06g00550 868 PANTHER OS04G0193200 PROTEIN 530 599 - -
Car06g00550 868 Pfam Methyl-CpG binding domain 196 241 IPR001739 GO:0003677
Car06g00550 868 Pfam Methyl-CpG binding domain 37 92 IPR001739 GO:0003677
Car06g00550 868 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 186 260 IPR001739 GO:0003677
Car06g00550 868 MobiDBLite consensus disorder prediction 832 868 - -
Car06g00550 868 MobiDBLite consensus disorder prediction 1 18 - -
Car06g00550 868 MobiDBLite consensus disorder prediction 84 190 - -
Car06g00550 868 CDD MBD 196 252 - -
Car06g00550 868 SUPERFAMILY DNA-binding domain 195 243 IPR016177 GO:0003677
Car06g00550 868 MobiDBLite consensus disorder prediction 1 58 - -
Car06g00550 868 PANTHER OS04G0193200 PROTEIN 651 853 IPR038945 -
Car06g00550 868 MobiDBLite consensus disorder prediction 608 638 - -
Car06g00550 868 MobiDBLite consensus disorder prediction 652 724 - -
Car06g00550 868 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 29 102 IPR001739 GO:0003677
Car06g00550 868 MobiDBLite consensus disorder prediction 101 166 - -
Car06g00550 868 MobiDBLite consensus disorder prediction 742 798 - -
Car06g00550 868 MobiDBLite consensus disorder prediction 653 673 - -
Car06g00550 868 SUPERFAMILY DNA-binding domain 27 93 IPR016177 GO:0003677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00550 - - mtr:MTR_8g096930 1143.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00550 06 5550057 5555411 Car06g00550 06 5550057 5555411 ECH