Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00539 ATGGAGGAATCTTCATCACCAAAAGCATCGTGTTGGAGCACCATTGTCAAGAAGGACGCACCGCCACCTCAGCAACAACAACCACTACTCTTAAATACCCAACACATTCTGGAAGATACTCGTAACCGTCATGGTATCTCCGTTGCCATTGTCGACGCCAACGCCGTCATCCAATCCGGCGAAACACTACACTCTCTCGCCGATAAGTTTGTCTCTGTCCCCGAAGTCATCGAGGAAATTCGTGATCCCGTTTCTCGCCATAGACTCTCTTTCCTTCCCTTCACTATCCAAACCATGGAACCTTCCCCTGAATCCATCAACAAAGTTGTCAAATTTGCTAGGGTTACTGGTGACCTACAGACTCTATCAGATGTTGATATCAAACTTATAGCGCTAGCTTATACTTTGGAGGCTCAGATTCATGGAACAAAACATCTTAAGGACAGCCCGCCTCCGGTGCAAACTGTGAATGTGAAGAGGCTTCCCGAGAAGGACTTGCCGGGATGGGGTTTGAATGTTCCTAATTTGCAAGAGTGGGAAGCATTGGAACGCGAAAATGAGGACAATGTGAATTCCAATTCGAGAATCCTTCCTTTGCAGGACTTGAGTTTGAACATTGTTCCACAAGATGATCTCTCTGTTGATGGTTCGGTTGACCATACTGCTGAAACTCCTTTGGAAATTCATGATGGTGGTGAGCGTGGTTCAATGAGACGTAAGAATTATCTGCCTAAGAAAAAGGTGGTAAACCTTGAAGGGAAGACGGTGGCTGAAGGAATTAATGCATCTCAAGGAGAAGTTGAGGACAACGGCGGTGATTGGATGCCTGCTGTCAGTCGTAGTACTCACAGGAGATTTCTAAGAAGGAAGGCTAGACGTGAGCAATATGAAGCATTATCCAGCAATCAAGATCCTCAAGATATGGAAGAAAACATTGATGGCAGTGTTAGTGAAGATGCTAAGGCTTCAAACCAGGTTCATGAAAACAATGATGAGAAGCATATTGAAAATGTTGTTTCCAAGAATGATATGATATCTGCCGAGAACTATGGGGATGAAGCCCTCTCTGCAACTCTGAAGCAAATGACTCTGGAAGAAGGTTCACTTGAAGCTCTTAATGAAGAAAACGCACTAAGTTTGTCACCCGAAGAACTCCAATCAAAGAATGCTGGACTGCTGGAAAGTGTGTCTGATGGCAGTGCAATTATGGATATTAAATCATGTGAAACAGATCCCGTCAATGACAAATCAAATTACTCTGAAATCGCAAGCCAGACCAGTGAAGCTGCTGATTTTTCAAATGCAGATGATGATGTCAGTGAGCAAAGTTGGATGGTTAGATCTTTGTCTGAGTCAACTGTGGCCTGTATAACTGGTGACTTTGCGATGCAAAATGTTCTTCTCCAAATGGGTTTGCGCTTGCTGGCACCTGGAGGATCACAGATACACCAATTGCACAGATGGATACTTAAGTGTCATGCCTGCTTCGCTGTTACTGCTGAAATTGGGAGGATTTTCTGTCCAAAATGTGGAAATGGTGGCACCTTAAGGAAGGTAGCAGTCACTGTTAATGAAAATGGAATAATGTTGGCAGCCCGTCGACCACGAATTACATTACGTGGCACAAAGTTCTCATTGCCTTTGCCCCAAGGTGGAAGAGATGCAGTCACAAAAAACGTTATTCTCCGTGAAGATCAACTGCCTCAAAGGGTACTTTATCCTAAAACAAAGAAGAAAGCCAACAAGGACGATGATTTCTTTACGCCAGACAATGTTTTCAGCCACCACAATGATAAGGGAGCTCCTTTCCAGGCTCCCGTAAGGAAAGCATTAGCAACTTTCAGCGGGAGAAGAAATCCAAATGACAATCACTACTCACGCTCTAAGCGCAAGTAG 1896 0.443 MEESSSPKASCWSTIVKKDAPPPQQQQPLLLNTQHILEDTRNRHGISVAIVDANAVIQSGETLHSLADKFVSVPEVIEEIRDPVSRHRLSFLPFTIQTMEPSPESINKVVKFARVTGDLQTLSDVDIKLIALAYTLEAQIHGTKHLKDSPPPVQTVNVKRLPEKDLPGWGLNVPNLQEWEALERENEDNVNSNSRILPLQDLSLNIVPQDDLSVDGSVDHTAETPLEIHDGGERGSMRRKNYLPKKKVVNLEGKTVAEGINASQGEVEDNGGDWMPAVSRSTHRRFLRRKARREQYEALSSNQDPQDMEENIDGSVSEDAKASNQVHENNDEKHIENVVSKNDMISAENYGDEALSATLKQMTLEEGSLEALNEENALSLSPEELQSKNAGLLESVSDGSAIMDIKSCETDPVNDKSNYSEIASQTSEAADFSNADDDVSEQSWMVRSLSESTVACITGDFAMQNVLLQMGLRLLAPGGSQIHQLHRWILKCHACFAVTAEIGRIFCPKCGNGGTLRKVAVTVNENGIMLAARRPRITLRGTKFSLPLPQGGRDAVTKNVILREDQLPQRVLYPKTKKKANKDDDFFTPDNVFSHHNDKGAPFQAPVRKALATFSGRRNPNDNHYSRSKRK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00539 631 Gene3D - 40 155 - -
Car06g00539 631 PANTHER RNA-BINDING PROTEIN NOB1 3 629 IPR039907 -
Car06g00539 631 SUPERFAMILY NOB1 zinc finger-like 482 545 IPR036283 -
Car06g00539 631 MobiDBLite consensus disorder prediction 296 330 - -
Car06g00539 631 Gene3D - 476 550 IPR036283 -
Car06g00539 631 MobiDBLite consensus disorder prediction 612 631 - -
Car06g00539 631 PANTHER - 3 629 - -
Car06g00539 631 Pfam PIN domain of ribonuclease 50 136 IPR033411 -
Car06g00539 631 Pfam Nin one binding (NOB1) Zn-ribbon like 482 552 IPR014881 -
Car06g00539 631 CDD PIN_Nob1-like 50 161 IPR033411 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00539 K11883 - gmx:100800291 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00539 06 5455196 5458330 Car06g00539 06 5455196 5458330 ECH