Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00528 ATGGTGAATCGACGCTTCACTCATGTACCAACCAGTGACGACGAAGAAGACGAGTCACCTCCCCTTTTCAACCACCAATCCACTCTCCAACATAACCAACCCAAAAGgaagaggatgaagctccaacaagaagacgacgatgaagaagaagaggaCTTAAACGACAATTTCAACAATAAAACGATTAAGCCGAACGACAACGAAGAGGAACCTTCCACCGACGAAGAGGAATCGCCACAGGAAGACGCTAATCCCGTTGGTGAACCAGTTAGGGTTTCAGGAAAAGGAAGAGGCAGAAAAAAACACTTCCGTTCCTTCGAATACGACGGAAGCCAATACACACTCGAAGATCCTGTGCTTCTTGTGCCTGAGGATAAAGATCAAAAGCCGTATGTGGCAATTATTAAGGACATTACACAAACCCTAAATGGTAGCTTGATGATCACAGGGCAATGGTTTTACCGTCCAGAAGAAGCAGAAAAAAAGGGAGGTGGTAGCTGGCAGTCACATGACACAAGAGAGCTGTTTTATAGCTTCCACCAAGACGAGGTTCCTGCAGAATCTGTTATGCATAAGTGTGTGGTGCATTTCATTCCCAGACATAAACAGCTTCCAAATCGTAAGCAGCATCCTGGGTTTATTGTGCAAAAGGTGTATGACACAGACGAAATGAAATTATGGAAGCTAACTGATAAGGACTATAAGGACAATAACCAGCAAGAAATTGATGAGTTTGTTCAGAAAACTATTCAACGATTGGGTGAACTACCTGACATTGAGACTAATGAAGCTTTTGCTGATCAGGAAGATCTGATGAAAAATAAAAGAATCTTAAAGAAAAGGAGTATTTCACCTCTCGATGTTTCAAGGGAGGAGGAAACATTTCGAAAGAGTGCCCAACATCTGAAAACTGAAACACCAAGGAGTCGTGTAGCTAATACCTCAGAGCATTATCGCATATTAGTCAATTTTAATGCACTAACAGGAGATACCCATCGTGACAAAGGTTTGGTGATGTTGCTTCAAAATGTTCAATACTTGTTTGATACCAAAGACAGCAGAAAGAAAAAAGACAAATGTAGTGACAATTCTGATGCAATAAACAAGGGATGCAATAACAGAAGTATAGAAATAGCAAATGAATGTAAAGACAAAGTTCTGAAGAGTTCGGAGTCTTTGGTCTGGCCAGATGTTGCTATTCCCGCTATAGTTGCGCTGGAGAAAGCTTCACATAATACATTTTCATCAGATTATCAGAAGTACAGCCAAAAGCTACGACAATTAGCATTTAATCTCAAGAACAATGCATTTTTGTTACGCCGTTTATTAAATGGAGAGCTGCGACCTTCAAAAATATTGAATATGACTCCCACTGAATTAAAGGAGGGTCTGACTGCTGAGGAAATATCCAAGAGTGAGCCCGATGAGCCACAGCACATGCAGATGACGGATGCTCGCTGCAAACTTTGTTCAGAGCGTAAGGTGGGCGTGAGGGATATTATCCGTGCAGGACATGTTGACCGATATATGCTGGAATGTACTACATGTGGTCATTCCTGGTCCGCCTCTCGTGATGCAGTGTCTGTGCTGACATTAGATGCATCAAATTCAGAAAGAAATGTAGGCACGGCCCCATGGGCGACGGCAAAATTTGAAGATGTTGAGAAGAAGCGGGTGAGTCCCCGTGAATCTGAAAAGTCGACCAATGACATCTTTAAGAAAACTAGTGAAGCATATATGCCTGTTTTGGAAGCCCAGAAATCATTTGGCAAGTCAAGGAAAGATGAAAACATAGAAGCTTCAAGACAATGTTACTGTGATGCTAGTTTCCCTCAAAGAGCTAATTATGGGTATTGGGCTGTGATGTTGATGTTTCAGGTAACAAGGCAATTTAACACTTCTGCTCTCGAAATGCCAAAAAAGCACTTCAATTTGACTTGGTCAAATCATCTCTTGGACAACTCCGAGTCCTTTGATGGTATTCCATTTGAATTTGCTTCTTGGGGTTCTCTTTTTCTTCACCAAGATCTACTCCAGCTTCTGGATTCATCAATGGGGAAAGAGCTGGAGTTAGACCTCAATGACAAATCTTCTGAAGGTCTGAGCCCGAATACCGTTCTTCCACCTCAGCAATATTGTGTGAATGTTAAGAAGAGATCCAAAAAAGGAAAACTTACAGGAAAAGACGAAGTTTTTACCATAAAGGAGGACTTTGCAGAGATTAAATTTGCACGATTCCGAAGTTCGTCGTGTAAGAGCCGTCTTTCTAGACCTCATGGATTGGAAGGTGATCCAGAAACAAGGAGGGTTTCCATGTATCAGATTTCAGAGGAAGTAAAAAACATACAGAAAATGGAGGGAAGGAAAAAGATAGAATTTTCAAGGAGGAGTGACATCTCTTTCTCAAGTAGCATTGTTGATTCTTTATGTGGTTCAGATGATGAAGATTCCAGGCAGAGACCTTCAAATATGTCTCAGCATTCGAATTCAGGTTCACCGTATGTTTCCAGGTCCTCGGCTTGCCAAGAACCTGACAATTCAAATGGATTTATTGAGATTTGCATGCATTCAGATGTTAAGAATAAAAAATCTACCTCAGTAGAACGGAGAGGTTCCGTAAATTTCAAGTCCAAAAGTGATGAAGTTGCTGATTCTATTATGAATGGCAATTTTCTTCTTCAAAAGGACAAAGTTCACTTACTACAGAAGTCACTCTCTGCTAAGGTGAAATCCTTTCACTTGCTACCTCCTTTGGAAAGCAATTTCTCATCGAGAGCGAGTGCTAAAGTGCGAGTCAACCCAATCACGAAAAGGATGAATCATTTCACGAAGTCAAAATCTTTGAGAAGTCCACTGAGTCATATCGTGGAAACTAATGAGGAAAAATCAAATGAGACAGCAAACATGATAAGCAACAGGACTTATCAGAAATATTTGCTGAATGACTTATCTAACACCGGAAAGCATTCCGACATTATTTCTGAGTTTATCAACCGAGAAATTCAGTATTCAGGTATAGCATCTTCACCGGTTCACCTGCATGGTAATCTCAAGGTGGAAAACAAACATGGAATGCCTTTTTTTGAGTTCAAGGTGAAATGTCCTGAAGATGTTTTTCTGGCCAAGACATGTAGAGTAGGTAATGGTTTCAATTGGGTATATAACTTTCATTCGATTGATAATAATAGAAAAAAGAGCAATGCCACTGTGTTGGAATCTCATGATCTTGACAAAGATTTCTCCATAGTAGCAAAGATGTTAGTTTCTAGTAATTTATGTTCTGAACAAGAAGACAACGTATTTGACAACTCTATGGTGACAGAATTTGTGTTGTATGATCTTTCACACTCGAGACATAGTGTTTCTTCCGAAAAGAAGTTATTTTGTGAACAAGATGCTTTCAAAACTCAAAAAGCTTCGCGTGTTGGATCGGAGGAAGAAACTTTCAAGATAGTTGAAGACAAGCCTCTATCAGGCAATGTTGAGTCTGGTGATTCACATTCTTTTCCTTTGTTGCCTACTGAATCCTGTTCAAACCTCGAAATTGCTGCCATTGTCATGGAAATTCCGTTTTCCAAGAGAGAAAGCTTGAAGTACAAGAGAGGGGATAGAGTATATGGTAAAGAAAGTTCCAACATAAGCAATCTTTGTGCAGTGGTTGATCAGAGAAGAAAGAGTCTTCATGACAGAAAAATCCATGAACAGTTCAAGGTGGTAATGCCAACTGGATACCATGGTTTGCCAAATGCTGAATGTCGAGGTCCCTCATCGTTACTTGATCGGTTGAGACACGGCGGAGGTTGTGACTGTGGTGGCTGGGACATGGCTTGTCCCCTTGTACTTTTAGGCAATCCTAGTATTCAATTTGCTGAAGACCATTCACTTCTAGAGGAATATCAACCATTGGAACTTTTTGTTCAGGGAGCAAAAGAAAGTAGTCCAACTTTCAGCATGAAAATGATTGAAGAGGGTCATTATGCTGTTGATTTTCATGCAAAGTTATCCACATTACAAGCATTCTCCATCTGTGTTGCCATTTTGCATGGAACTTCATCCTCCAGAGGTGCAAGGCACGAGAAAAACCAGAAGTTATCTCAATGCAGTTCATTGAAAATGCTTCTTGAGGAGGATGTAGAGTGTTTTTTCAAATCGATTGCATCCGAGAAGAAGACTGTGTTCAAGACTCCAAAAGGAATTCCTAGATCCTATGTGACGAACCCACCTTTTTCTCCTATTGCACGAGTATAA 4248 0.4004 MVNRRFTHVPTSDDEEDESPPLFNHQSTLQHNQPKRKRMKLQQEDDDEEEEDLNDNFNNKTIKPNDNEEEPSTDEEESPQEDANPVGEPVRVSGKGRGRKKHFRSFEYDGSQYTLEDPVLLVPEDKDQKPYVAIIKDITQTLNGSLMITGQWFYRPEEAEKKGGGSWQSHDTRELFYSFHQDEVPAESVMHKCVVHFIPRHKQLPNRKQHPGFIVQKVYDTDEMKLWKLTDKDYKDNNQQEIDEFVQKTIQRLGELPDIETNEAFADQEDLMKNKRILKKRSISPLDVSREEETFRKSAQHLKTETPRSRVANTSEHYRILVNFNALTGDTHRDKGLVMLLQNVQYLFDTKDSRKKKDKCSDNSDAINKGCNNRSIEIANECKDKVLKSSESLVWPDVAIPAIVALEKASHNTFSSDYQKYSQKLRQLAFNLKNNAFLLRRLLNGELRPSKILNMTPTELKEGLTAEEISKSEPDEPQHMQMTDARCKLCSERKVGVRDIIRAGHVDRYMLECTTCGHSWSASRDAVSVLTLDASNSERNVGTAPWATAKFEDVEKKRVSPRESEKSTNDIFKKTSEAYMPVLEAQKSFGKSRKDENIEASRQCYCDASFPQRANYGYWAVMLMFQVTRQFNTSALEMPKKHFNLTWSNHLLDNSESFDGIPFEFASWGSLFLHQDLLQLLDSSMGKELELDLNDKSSEGLSPNTVLPPQQYCVNVKKRSKKGKLTGKDEVFTIKEDFAEIKFARFRSSSCKSRLSRPHGLEGDPETRRVSMYQISEEVKNIQKMEGRKKIEFSRRSDISFSSSIVDSLCGSDDEDSRQRPSNMSQHSNSGSPYVSRSSACQEPDNSNGFIEICMHSDVKNKKSTSVERRGSVNFKSKSDEVADSIMNGNFLLQKDKVHLLQKSLSAKVKSFHLLPPLESNFSSRASAKVRVNPITKRMNHFTKSKSLRSPLSHIVETNEEKSNETANMISNRTYQKYLLNDLSNTGKHSDIISEFINREIQYSGIASSPVHLHGNLKVENKHGMPFFEFKVKCPEDVFLAKTCRVGNGFNWVYNFHSIDNNRKKSNATVLESHDLDKDFSIVAKMLVSSNLCSEQEDNVFDNSMVTEFVLYDLSHSRHSVSSEKKLFCEQDAFKTQKASRVGSEEETFKIVEDKPLSGNVESGDSHSFPLLPTESCSNLEIAAIVMEIPFSKRESLKYKRGDRVYGKESSNISNLCAVVDQRRKSLHDRKIHEQFKVVMPTGYHGLPNAECRGPSSLLDRLRHGGGCDCGGWDMACPLVLLGNPSIQFAEDHSLLEEYQPLELFVQGAKESSPTFSMKMIEEGHYAVDFHAKLSTLQAFSICVAILHGTSSSRGARHEKNQKLSQCSSLKMLLEEDVECFFKSIASEKKTVFKTPKGIPRSYVTNPPFSPIARV 1415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00528 1415 MobiDBLite consensus disorder prediction 1 99 - -
Car06g00528 1415 PANTHER EXPRESSED PROTEIN 689 1415 - -
Car06g00528 1415 ProSiteProfiles BAH domain profile. 111 230 IPR001025 GO:0003682
Car06g00528 1415 ProSiteProfiles TFIIS central domain profile. 378 488 IPR003618 GO:0006351
Car06g00528 1415 SMART BAH_4 111 230 IPR001025 GO:0003682
Car06g00528 1415 SMART mid_6 365 470 IPR003618 GO:0006351
Car06g00528 1415 MobiDBLite consensus disorder prediction 822 843 - -
Car06g00528 1415 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 689 1415 - -
Car06g00528 1415 Pfam Transcription factor S-II (TFIIS), central domain 328 476 IPR003618 GO:0006351
Car06g00528 1415 Pfam BAH domain 112 227 IPR001025 GO:0003682
Car06g00528 1415 Gene3D - 310 462 IPR036575 GO:0006351
Car06g00528 1415 MobiDBLite consensus disorder prediction 810 843 - -
Car06g00528 1415 CDD BAH_plant_3 93 239 - -
Car06g00528 1415 Pfam Domain of unknown function (DUF3527) 1010 1349 IPR021916 -
Car06g00528 1415 SUPERFAMILY Elongation factor TFIIS domain 2 398 461 IPR036575 GO:0006351
Car06g00528 1415 Gene3D - 18 216 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00528 Car-Chr6 5363214 5374446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00528 - - cam:101501082 2629.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00528 06 5363214 5374446 Car06g00528 06 5363214 5374446 ECH