Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00515 ATGCCACCCTTTGTAGGTTCTACTGATTCCCAACCAAGACCAGATTCAAACATAGTCACCATCGACGTTGGTGGACAAATGTTTCAAACCACAAAACAAACATTAACCTCTTCAGGTCCAAAAACCTTCTTCTCAAGAATCGCTCAAGCTGCTTCACCTTACACACCTTTCGTTGACCGAGACCCTGAACTTTTCTCTCTCCTCCTCTCTCTCCTCCGTACCGGTAACCTTCCTTCCAAAGCCAAATCCTTCGATCTTCAAGACCTTATTATTGAATCCAAATTTTACGGCATCGAAAATCTTTTAATCAATTCTTTCTCTCAATTGGAACCTTTTAATCTTCAAAAATCTCTTCAGTTACCCTTGAACGGAAGAGACTCTCCCTCTGCCGTCGCAACCACCCCTTACGGCTCCGTTCATGTTGCTCACGGTAGCAAGATTACGACGTTTGATTGGTCTCTTCGTCGGAAATCTACCATTCTTACACACTTCACCGCCGTTGATTCTCTTCTTGCTTTATCGCCGGAGTTAGCCGCCGCCGGCGCTAACGACTTCTCCGGCCTCCAGATTCTCGATCTGGAAAAAGGACACGTGAAGGAAACATTAAATTGGGAAAACGTAACGAAATCAGGTTCGACCGTTCAAGCAATCGGATCTTCGCCGGAGCAAATGTTCGTCAGCTTCGAATCTTCCCGGAGAAACTCCAATTCCATCATCGTTTACGATTTGCATAGCTTCAGACCTATTACCGAAATCGGCCACAATGAGATCTACGGCGCCGACATCGATTCCGCGATTCCGGCGACGAAATTGCAGTGGATTGAAGGTTACAATCTTTTAATGGCGTCTGGGTCCCACAGCGGTCCTTCCGGTGTTTCCGGTAACGTTAGGTTATGGGACGTTCGTTCCGGTGACATTGTTTGGGAGATCTCAGAGAAAGTTGATTGTTTTGCTGACGTGGCAGTTTCTGATGCGTTGTCGAGTGATAAGAGAAAATTGTTGAATGCGAAAAAAGAAGGGTTTGGTTGCAAAATTGAAACACAAGGGAATCAAGTGTTTTGCACTAAGGGTGGGGATGTGGAACTTTGGTCAGAGATTATAATGGATTCTTCTTCTAATAATTCTAATAATAGGATTTTCAAGAAGAATTTGATGGGTAGGGTGCAAGATATGGGAGGTGCTAGGATTACCAATTTGGCATTTGGAGGGAGTAGGATGTTCTTGACTAGAAAAGATATGCAATGTGTTGAGGTTTGGCAGAGTTCTTCTAGGGAACTTTGA 1281 0.445 MPPFVGSTDSQPRPDSNIVTIDVGGQMFQTTKQTLTSSGPKTFFSRIAQAASPYTPFVDRDPELFSLLLSLLRTGNLPSKAKSFDLQDLIIESKFYGIENLLINSFSQLEPFNLQKSLQLPLNGRDSPSAVATTPYGSVHVAHGSKITTFDWSLRRKSTILTHFTAVDSLLALSPELAAAGANDFSGLQILDLEKGHVKETLNWENVTKSGSTVQAIGSSPEQMFVSFESSRRNSNSIIVYDLHSFRPITEIGHNEIYGADIDSAIPATKLQWIEGYNLLMASGSHSGPSGVSGNVRLWDVRSGDIVWEISEKVDCFADVAVSDALSSDKRKLLNAKKEGFGCKIETQGNQVFCTKGGDVELWSEIIMDSSSNNSNNRIFKKNLMGRVQDMGGARITNLAFGGSRMFLTRKDMQCVEVWQSSSREL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00515 426 Gene3D - 129 426 IPR015943 GO:0005515
Car06g00515 426 PANTHER PROTEIN BINDING PROTEIN 12 328 - -
Car06g00515 426 PANTHER PROTEIN BINDING PROTEIN 329 424 - -
Car06g00515 426 SUPERFAMILY WD40 repeat-like 118 324 IPR036322 GO:0005515
Car06g00515 426 SMART BTB_4 17 113 IPR000210 GO:0005515
Car06g00515 426 Pfam BTB/POZ domain 19 105 IPR003131 GO:0051260
Car06g00515 426 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 329 424 IPR045068 -
Car06g00515 426 SUPERFAMILY POZ domain 16 107 IPR011333 -
Car06g00515 426 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 12 328 IPR045068 -
Car06g00515 426 Gene3D Potassium Channel Kv1.1; Chain A 7 117 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00515 Car-Chr6 5252125 5253495 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00515 - - gmx:100792189 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00515 06 5252125 5253495 Car06g00515 06 5252125 5253495 ECH