Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00512 ATGGCACGGTTGGTTCTTCCATCGAAGACACTGGCTTTTTCGAGGAAGAGTCTTCTCGGTTTCATCTCCCCCGCTCCTCTTCAGATTAATTGCTGTGTTAATTATCTTCAGAAAGCTTCCAAAAGTAGTGTCAGATATAGACATTTCCTTGCATCTGAGGTCATTCTCCGAAATAATTGTTGCCCATTTTATTCTTCCTTACCGAGAGTCAAGAAAGCAAGTAGGAAGCTAATTTGTTCTGTTGCCACCGAGGATTTGCCAAAGCAAGTTGAAGAATCTAAAATGGCGACACCAAGAGAAATATTCTTAAAGGATTACAAAATGCCCGATTACTACTTTGAAACTGTGGACCTGAAATTTTCCCTAGGAGAGGAGAGCACAATAGTTAGTTCTAAAATCGCTGTGTCTCCTCGCGTTGAAGGTTCTTCTCCCCCGCTAGTTTTGGATGGACAAGACATGACTTTAGTTTCAGTTCAGATTAATGGCAAGGCATTGAAGGAGGAAGATTATCATTTGGATGCACGCCATCTAACAATCCAATCGCCTCCTAGTGGTAAATATGATCTTGAAATTGTTACTGAGATTCAACCACAGAAAAACACATCATTAGAGGGGCTTTACAAGTCATCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAATCACGTTTTATCAGGATCGGCCTGATATAATGGCAAAGTATACAGTTCGCATTGAGGCAGACAAATTACTGTATCCAGTATTGTTGTCTAATGGAAACCTGGTTGGACAGGGTGACTTGGAGGGTGGCAAACATTATGCTGTTTGGGAGGACCCCTTCAAGAAACCTTGTTATCTGTTTGCTTTGGTTGCTGGGCAGCTGCAGAGCAGAGACGACACATTTACTACCCGCTCGGGAAGGAAGGTGTCCCTTAGGATCTGGACACCTGCAGATGATGTACCTAAGACTGCACATGCTATGTATTCTTTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACCTGGATCTCTTCAATATTGTTGCTGTCCCAGATTTTAATATGGGAGCCATGGAAAACAAAAGCTTGAATATTTTCAATTCCAAACTTGTATTGGCTTCCCCAGAGACTGCTTCGGATGCAGATTATGCTGCAATTTTGGGAGTTATTGGCCACGAGTATTTCCACAATTGGACTGGCAACAGAGTGACATGTCGCGACTGGTTCCAGCTTAGTTTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGAATTCTCATCTGACCTTGGAAGCCGTACTGTAAAGAGGGTTGGTGATGTTTCAAAACTTCGAAGTTATCAGTTTCCACAGGATGCAGGTCCTATGGCCCATCCAGTGCGACCACACTCTTACATCAAGATGGACAACTTCTACACAGTTACGGTCTACGAAAAGGGGGCTGAAGTTGTTCGAATGTACAAAACCTTATTGGGAAGTCAAGGGTTCCGAAAGGGCATGGATCTTTATTTTAAGAGACATGATGGGCAAGCTGTCACATGTGAAGATTTTTATGCTGCCATGCGAGATGCAAATGATGCAGATTTTGCAAATTTCTTACTGTGGTACTCTCAAGCTGGGACTCCTGTTGTTAAAGTAAATACTTCTTACAATCCTGAAGCACATACATTTTCTTTGAAGATTAGTCAAGAGATACCAGCAACTCCAGGGCAGTCAGTTAAGGAACCCATGTTCATTCCCATTGCAGCAGGCTTGCTTGATTCAACTGGAAAGGACATTCCTCTTACGACTATTTATCATGACGGGGCTTTGAAATCTGTTTCAAGCAATGACCAATCAGTCTGCACTACAGTCCTTAGAGTTACTAAGAAAGAAGAAGAGTTTGTATTCACTGATATCTTTGAGAGGCCCGTTCCATCTTTGTTAAGAGGATACAGTGCTCCTATTCGTCTTGAATCCGATCTCACTGATGATGACCTGTTTTTCCTATTAGCCAATGATTCTGATGAATTCAACCGATGGGAGGCTGGACAAACTTTGGCACGAAAGTTGATGCTCACTTTGGTGGATGATTTCCAACATAATAAACCATTGGTTCTGAATTCCAGTTTTGTTGATGGGTTTAAACGTATACTATGTGACTCAAGTCTGGACAAAGAGTTTGTGGCAAAGGCAATAACTCTGCCTGGTGAGGGAGAAATAATGGACATGATGGAAGTTGCAGACCCTGATGCTGTTCATACTGTTCGGTCTTTCATCAGGAAGCAGCTTGCGAGTGAACTGAGATCAGAACTCCTTAGCACAGTAGAAAATAATAGGAGCTCAGAAGAATATGTGTTCAATCATGCACACATGTCCAGACGTGCTTTGAAGAATGTTGCTCTTGCTTATCTTGCAAGCCTCGAGGATCAAGAATTCACCAACCTTGCACTTCAAGAGTACAAAACTGCTACAAATATGACCGAGCAGTTTGCAGCATTGGCTTCCGTAGCCCAGAACCCTGGTAAAGCTCGTGATGATGTTCTCGCTGACTTTTATGACAAGTGGCAGAATGAGTACTTGGTAGTGAACAAATGGTTTGCTCTTCAAGCAGTGTCTGACATTCCTGGTAATGTTGAGAATGTGCGGAAATTGTTAAGCCACCCAGCATTTGACCTGCACAATCCCAACAAAGTCTACTCTCTCATTGGAGGTTTTTGTGGGTCTCCTGTGAACTTCCACGCAAAGGATGGGTTGGGCTACGAGTTTTTGGGAGATCTTGTGGTTCAACTTGACAAAATAAATCCTCAGGTTGCCTCAAGAATGGTGTCAGCCTTCTCAAGGTGGAGGCGCTACGATGAGAACAGACAAAAACTTGCAAAGGCCCAGTTGGAGAAGATCATGTCTTCTAATGGCCTATCAGAAAATGTTTTTGAAATTGCTTCGAAAAGTTTAGCTGCTTAA 2946 0.427 MARLVLPSKTLAFSRKSLLGFISPAPLQINCCVNYLQKASKSSVRYRHFLASEVILRNNCCPFYSSLPRVKKASRKLICSVATEDLPKQVEESKMATPREIFLKDYKMPDYYFETVDLKFSLGEESTIVSSKIAVSPRVEGSSPPLVLDGQDMTLVSVQINGKALKEEDYHLDARHLTIQSPPSGKYDLEIVTEIQPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTVRIEADKLLYPVLLSNGNLVGQGDLEGGKHYAVWEDPFKKPCYLFALVAGQLQSRDDTFTTRSGRKVSLRIWTPADDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRTVKRVGDVSKLRSYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFYAAMRDANDADFANFLLWYSQAGTPVVKVNTSYNPEAHTFSLKISQEIPATPGQSVKEPMFIPIAAGLLDSTGKDIPLTTIYHDGALKSVSSNDQSVCTTVLRVTKKEEEFVFTDIFERPVPSLLRGYSAPIRLESDLTDDDLFFLLANDSDEFNRWEAGQTLARKLMLTLVDDFQHNKPLVLNSSFVDGFKRILCDSSLDKEFVAKAITLPGEGEIMDMMEVADPDAVHTVRSFIRKQLASELRSELLSTVENNRSSEEYVFNHAHMSRRALKNVALAYLASLEDQEFTNLALQEYKTATNMTEQFAALASVAQNPGKARDDVLADFYDKWQNEYLVVNKWFALQAVSDIPGNVENVRKLLSHPAFDLHNPNKVYSLIGGFCGSPVNFHAKDGLGYEFLGDLVVQLDKINPQVASRMVSAFSRWRRYDENRQKLAKAQLEKIMSSNGLSENVFEIASKSLAA 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00512 981 Gene3D Neutral Protease Domain 2 377 540 IPR027268 -
Car06g00512 981 Gene3D - 292 376 - -
Car06g00512 981 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 548 - -
Car06g00512 981 Pfam Peptidase family M1 domain 325 533 IPR014782 GO:0008237|GO:0008270
Car06g00512 981 PANTHER - 57 475 IPR012779 GO:0008270
Car06g00512 981 PANTHER - 476 981 IPR012779 GO:0008270
Car06g00512 981 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 98 289 IPR042097 -
Car06g00512 981 Pfam Peptidase M1 N-terminal domain 110 283 IPR045357 -
Car06g00512 981 Gene3D - 541 654 IPR038438 -
Car06g00512 981 Pfam Domain of unknown function (DUF3458_C) ARM repeats 658 980 IPR024601 -
Car06g00512 981 PRINTS Membrane alanyl dipeptidase (M1) family signature 273 288 IPR001930 GO:0006508
Car06g00512 981 PRINTS Membrane alanyl dipeptidase (M1) family signature 355 365 IPR001930 GO:0006508
Car06g00512 981 PRINTS Membrane alanyl dipeptidase (M1) family signature 391 406 IPR001930 GO:0006508
Car06g00512 981 PRINTS Membrane alanyl dipeptidase (M1) family signature 410 422 IPR001930 GO:0006508
Car06g00512 981 Gene3D tricorn interacting facor f3 domain 108 291 IPR042097 -
Car06g00512 981 PANTHER BNAC06G01820D PROTEIN 57 475 - -
Car06g00512 981 PANTHER BNAC06G01820D PROTEIN 476 981 - -
Car06g00512 981 CDD M1_APN 105 538 - -
Car06g00512 981 Gene3D - 656 980 IPR037144 -
Car06g00512 981 Pfam Domain of unknown function (DUF3458) Ig-like fold 541 654 IPR035414 -
Car06g00512 981 TIGRFAM pepN_proteo: aminopeptidase N 105 979 IPR012779 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00512 K01256 - gmx:100775476 1766.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00512 06 5218447 5227710 Car06g00512 06 5218447 5227710 ECH