Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00490 ATGAAGTGCAGATCTGTCGCGTGCATATGGTCAGGCACACCCTTCCCTTCCGCTCACAAACTAACCGCTGTCGTTGCTTTCACCCAACCACCAACCTCCGCCTTTTACACCGCCGGATCCGATGGCTCCATCATCTGGTGGACCCTttccacttccacttcctctccgCAAGTTAAAGCGGTTGGAGTGTTATGTGGTCACGCATCACCAATCACTGATCTCGCTCTTTGTACTCCAATCTCACCCGAAGAAAACGACGACGTTTCAATGACAACTAATTTCACTGCGTTGATAAGTGCTTCTTGTGATGGTTTCTTGTGTGTGTGGAGTAAAAGCAGTGGACACTGTCGTTGCAGAAGGAAATTACCACCTTGGGTTGGTACTCCACTTGTAATTCGAACACTTCCTTCTACACCGCGATATGTTTGTATAGCTTGTTCTTTTGTTGATTATTACTATTCTGTTAATGATCAGTTAGGGGACAGAGAAAATCACCATAGGAAGAATTCTAAATCTACCATCCTTATTGTGGATACATATTTGCTTTCCATTACTCAAACTGTTTTTCATGGACATTTATCCATTGGTCCTATTAATTTTATGTCACTGGTTTTTTCTGATGATGACGAGAAGAGGAATTCGGTTTTTGTGGCTGATTCTTTTGGGAAACAACAGATGGTTTCCATATTGGATGAGCCACACGATTGTGTGGAAAGCTTGGCGAGTCCACACAATGATAAATTGCCGTTGGAAAGTTCTTTTTCTGGTGAGGGATTCTGCGGTGTCGATCAAGTTGTTTTGGTTTTAACCTTTGGGAACGTTGTTGGTTTTGTATTGAAAAATAGATGTATTTTTAGGTCATTGTTTAGTGATACTACAATTGGAGAGGTTTCTTTTGTGGACAACCTCTTTTTTTCAGATGGGTGTTCCACTCAAGCACATGCTATTGGTGGCATTGTTCTTGAAAGCGATGATGTGGGGAATACACCTGATACCTATGAATGTGGAAACTTGATTCCAGTACATTTTGTTGTTTGGAATAACAGAGGTTATGCAATTATCTATGAAATATCGTATCAGAATGATGTTTTTCAATGTGAACCGTATTCTGAGATTCCTGCCGGTCATTATCAACCTGAAATAAGGTTATCTACTTTTTTCCTACAAGTGAGTCAAAATCTTGTGTGCATCAAGTCAGTTTGTTTTGATCACGAGGAGCCTTTACTATGGAGACCACATATCACAATTTGGTCACTGCATCAATTTGATGATAAACCGGGCAAATTGTGCCGTCAATGCAGAATGGTCAGCGATGGTGCATCTTTCACCGACTGGTTTGAGAAGTCTAATCAGCTCAACAGACTTGGTGATGTAGATATTAAATCAACCTTTGGTGCAAGTCCAGGTTCTGAGGACATAGACAACATACATGAGGACATTATAAGTAATTATTATCCTTACAAGGGGAAGATAGTTTCTTCTTCCATGATTATCGCCGAGAACCTCTTTACTCCTTATGCTGTCGTATATGGATTTTTGAGTGGAGAAATAGAGCTTGTAAGATTTGATCAATTTCAAGGGATTTTCCTGGATGATGAAAGTTCCAATCCTGATGAAAAGCCAACTGCATGCAAACAGAATTTCACAGGACATACAGGTGCCGTACTTTGTTTGGCAGCGCATCAAATGATGGGCAGTGCCAAAAGCTGCACTTTTAAACGGGTTTTGGTTTCTGGCAGTTTGGATTGCACAATCCGTATATGGGATCTTGACACTGGCAGTCTTATTAAGGTAATGCATCATCATGTGGCCGCAGTGCGTCAAATTATACTTCCCCCATCTGTGACAGGACATCCTTGGAGTGACTGTTTTCTTTCAGTTGGAGAGGATGCATGTGTTGCTCTTGTTTCTCTTGAGACTCTGCAGGTGGAACGAATGCTTCCTGGACACATGAACTATCCTTCAAAAGTTTTATGGGATGGAGCAAGAGGTTATATTGCCTGTCTCTGTCAAACACATTATGGAACTTCTGATGGTGATGTATTATACATTTGGGATGTAAAGACAGGTTCCCGTGAGCGACTCCTACGCGGGACAGCTGCACATTCTATGTTTGATCATTTTTGTAAAAGTATCAGTATGAATTCCATATCTGGCTCAGTGCTGAATGGAAATACGTCAGTCGCTTCATTACTTCTCCCAATAGTCGATGATGCAAGGCTCTCTAACTCTCCCTTAACTCATACAGGGAACTTGCTTCCTTCATCAAAGTCATCACCAAGTATTTCAAGCATGACTGAGCTGAATTCTTCTAAACCAAATGCAGGTAAAGGCAATTCACCAAAGTCAAATTCACCATCTCTGTTTGGTCTTTTGAGTAACAAACTTCCTATCAAATGCTCTTGCCCATTCCCTGGTATTGTGTCCCTGAGTTTTGATCTTGCATCGTTGATGTTCTCTTTTCAAAAGAATGAGTCCATGGAGAATGGTGATGGCAAGCCAGTGAATAACAATGTGAAGCAGAAGGGTGTTCAGGAGAAAAATCCAAGCTACCATAATCCAGAAACTTCAGAGGGGCACAATTGGATTAGCCTTTTTGAAGAATACTTACTGCGTTACAGTTTGTCATTTTTACATTTGTGGAACGTAGACAGTGAGCTTGATAATTTGTTGATAAGTGATATGAAACTGAGGAGACCAGAAAATTTTATTGTAGCTTCGGGTCTGCAGGGGGATAAAGGGTCATTAACATTGTCATTTCCTGGTGAGAGTGCTGCTCTTGAGCTGTGGAAGTCATCATCTGAGTTTTCTGCAATGAGATCATTGACAATGGTATCCCTTGCCCAACGATTAATTAGCCTGTCTCACTCAAGTTCAGCGGCCAGCAGTGCATTGGCAGCATTCTATACCAGGAATTTCATGGAAAATTTTCCAGATATGAAGCCACCTTCTTTACAGCTCTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTACGAATGGCTGCACGCTCTATATTTCACTGTGCTGCCTCTCATGCTATTCCTCTACCTCTATGCAATTCAAAACGTAATGAGTCAAATAATACAATCTCCCGAACTGGAAGTAAAGACAAACATCTGGGAGATGTTATAGTAGAAAGCATATCTCCGAAGACCGAAAACCAAGGAATTTCTCAAGATGAGGAATCCAAAATACTTACTTGGCTAGAATCATATGAAGTGCAAGATTGGATTTCTTGTGTTGGTGGAACCAGTCAAGATGCAATGACATCTCACATTATTGTAGCTGCTGCACTGGCTATCTGGTATCCTAGTCTTGTAAAACCTAAGCTTTCCATGTTAGTTGTTCATCCGTTAATGAAGTTGGCTATGGCCATGAATGAAAAATACAGCTCCACTGCCGCTGAGCTCCTTGCAGAGGGCATGGAGAGCACGTGGAAAGAATACATGGTCTCTGAGATTCCTCATCTAATTGGGGATATTTTTTTCCAAGTAGAGTTGAGTGGCCCATCTTCCAAGTCAGTGACAGACATTCCAGCAACATCTTTTTCTATTAAACAGACTTTGGTGGAGGTTTTACTTCCAAGCTTAGCAATGGCTGATATACCAGGTTTTTTGACAGTGATCGAAAGCCAAATTTGGTCAACTGCATCTGATTCACCTGTCCACATGGTATCCTTGTTGACTCTCATAAGGATTATGCGTGGTTCTCCAAGAAATTTGGCTCACTACCTTGACAAGGTTGTCAACTTCATTTTACAGACTATAGATCCTAGCAACTCAGTTATACGGAAGGCATGCTTCCAGAGTTCAATGACAACTTTCAAAGAAGTTGTACGTGTATATCCTATGGTTGCGTTCAACGAGTCTTGGACCAGACTAGCAGTTGGAGATGTGATTGGAGAAGTTAACAATGCAAGCATTAGGGTTTATGATATGCAAAGTGTGACAATGATAAAAGTTTTGGATGCAAGTGGGCCACCTGGACTTCCAAATTTGCTCACAGCAACGGCTTCGGGAACAGTGTTAACTACTGCGATCTCAGCGCTAAGCTTTTCGCCAGATGGAGAGGGGCTCGTTGCATTTTCGGAACATGGGCTCATGATTAGATGGTGGTCACTGGGATCTTTCTGGTGGGAGAAACTGAGCCGTAACTATGTTCCTGTCCAGTGCACAAAACTAATCTTTGTTCCTCCTTGGGAAGGATTCTCTCCTAATTCATCACGGTCAAGCATTATGGCCAACATTTTGGATACTGAAAAGCAGCTGAATTTGCCGGATAATACGAGGGATTCAAATCATGGGGACAGTTTGAAGCAATTGCTCCATAATCTGGACCTCTCTTATCGATTAGAATGGGTTGATGACCGGAGAGTACTTCTTACAAGGCATGGTAATGAATTGGGCACTTTTCAGTTGTAA 4425 0.4142 MKCRSVACIWSGTPFPSAHKLTAVVAFTQPPTSAFYTAGSDGSIIWWTLSTSTSSPQVKAVGVLCGHASPITDLALCTPISPEENDDVSMTTNFTALISASCDGFLCVWSKSSGHCRCRRKLPPWVGTPLVIRTLPSTPRYVCIACSFVDYYYSVNDQLGDRENHHRKNSKSTILIVDTYLLSITQTVFHGHLSIGPINFMSLVFSDDDEKRNSVFVADSFGKQQMVSILDEPHDCVESLASPHNDKLPLESSFSGEGFCGVDQVVLVLTFGNVVGFVLKNRCIFRSLFSDTTIGEVSFVDNLFFSDGCSTQAHAIGGIVLESDDVGNTPDTYECGNLIPVHFVVWNNRGYAIIYEISYQNDVFQCEPYSEIPAGHYQPEIRLSTFFLQVSQNLVCIKSVCFDHEEPLLWRPHITIWSLHQFDDKPGKLCRQCRMVSDGASFTDWFEKSNQLNRLGDVDIKSTFGASPGSEDIDNIHEDIISNYYPYKGKIVSSSMIIAENLFTPYAVVYGFLSGEIELVRFDQFQGIFLDDESSNPDEKPTACKQNFTGHTGAVLCLAAHQMMGSAKSCTFKRVLVSGSLDCTIRIWDLDTGSLIKVMHHHVAAVRQIILPPSVTGHPWSDCFLSVGEDACVALVSLETLQVERMLPGHMNYPSKVLWDGARGYIACLCQTHYGTSDGDVLYIWDVKTGSRERLLRGTAAHSMFDHFCKSISMNSISGSVLNGNTSVASLLLPIVDDARLSNSPLTHTGNLLPSSKSSPSISSMTELNSSKPNAGKGNSPKSNSPSLFGLLSNKLPIKCSCPFPGIVSLSFDLASLMFSFQKNESMENGDGKPVNNNVKQKGVQEKNPSYHNPETSEGHNWISLFEEYLLRYSLSFLHLWNVDSELDNLLISDMKLRRPENFIVASGLQGDKGSLTLSFPGESAALELWKSSSEFSAMRSLTMVSLAQRLISLSHSSSAASSALAAFYTRNFMENFPDMKPPSLQLLVAFWQDESEHVRMAARSIFHCAASHAIPLPLCNSKRNESNNTISRTGSKDKHLGDVIVESISPKTENQGISQDEESKILTWLESYEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPKLSMLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKEYMVSEIPHLIGDIFFQVELSGPSSKSVTDIPATSFSIKQTLVEVLLPSLAMADIPGFLTVIESQIWSTASDSPVHMVSLLTLIRIMRGSPRNLAHYLDKVVNFILQTIDPSNSVIRKACFQSSMTTFKEVVRVYPMVAFNESWTRLAVGDVIGEVNNASIRVYDMQSVTMIKVLDASGPPGLPNLLTATASGTVLTTAISALSFSPDGEGLVAFSEHGLMIRWWSLGSFWWEKLSRNYVPVQCTKLIFVPPWEGFSPNSSRSSIMANILDTEKQLNLPDNTRDSNHGDSLKQLLHNLDLSYRLEWVDDRRVLLTRHGNELGTFQL 1474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00490 1474 Pfam WD domain, G-beta repeat 544 589 IPR001680 GO:0005515
Car06g00490 1474 SUPERFAMILY Nucleoporin domain 25 250 - -
Car06g00490 1474 ProSitePatterns Trp-Asp (WD) repeats signature. 576 590 IPR019775 -
Car06g00490 1474 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1474 - -
Car06g00490 1474 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1474 - -
Car06g00490 1474 SUPERFAMILY ARM repeat 959 1270 IPR016024 -
Car06g00490 1474 Gene3D - 9 238 IPR015943 GO:0005515
Car06g00490 1474 MobiDBLite consensus disorder prediction 746 784 - -
Car06g00490 1474 ProSiteProfiles Trp-Asp (WD) repeats profile. 576 598 IPR001680 GO:0005515
Car06g00490 1474 SUPERFAMILY WD40 repeat-like 28 703 IPR036322 GO:0005515
Car06g00490 1474 SUPERFAMILY WD40 repeat-like 1286 1378 IPR036322 GO:0005515
Car06g00490 1474 MobiDBLite consensus disorder prediction 826 855 - -
Car06g00490 1474 Gene3D - 516 780 IPR015943 GO:0005515
Car06g00490 1474 SMART WD40_4 5 48 IPR001680 GO:0005515
Car06g00490 1474 SMART WD40_4 541 589 IPR001680 GO:0005515
Car06g00490 1474 SMART WD40_4 1332 1374 IPR001680 GO:0005515
Car06g00490 1474 SMART WD40_4 640 686 IPR001680 GO:0005515
Car06g00490 1474 SMART WD40_4 592 637 IPR001680 GO:0005515
Car06g00490 1474 SMART WD40_4 57 110 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00490 K24738 - gmx:100818675 2321.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00490 06 4946758 4957654 Car06g00490 06 4946758 4957654 ECH