Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00485 ATGAACGATATTCCGAAGCACGAGCGCCGTTGGGCGTCAGACACCATTCCTGGAAAAGTAACAGTCAGCGCCGGAACATCGCCGGGAACTGAGTCAAGCTCCGCCGGCGATGAGTTTGTCGAGGTAACTCTTGATCTTCGAGACGATGACACCATCGTTCTTCGCAGTGTTGAGCCAGCTAATGTTATTTCTATCGACGATAGCGTCGCCGGAAGCGGTTACGAAACTCCGGTGTCTGTTCCGAGGTCGCCGTCGATTCGGAGAAACTCGTCGAGAGGCTTCCGGCAATTCTCTCAGGAACTGAAAGCAGAGGCGGTTGCTAAGGCCAAACACTTCTCGCAGGAGCTACGGCGGTTCTCGTGGAGTCACGGCCAAGCTTCGCGTGCCTTTTCATCTTCCTCCGCTCAAACCGGCGCCGGCGGTTCTGCCGGCGGTGGATTTGAAACGGCGTTGGCCGCTCGAGCTTTGAGGAAGCAACGAGCGCAACTCGATCGCACTCGCTCCGGTGCTCATAAAGCACTCCGTGGTTTGAAATTCATCAGCAGTGCCAGTAAATCGAATGGCGTTGATGCGTGGAACGAAGTGCAGAAGAATTTCGATAGGCTTGCTAAAGACGGTTTTCTCCATCGCATCGATTTCGGTCAATGCATAGGTATGAAAGATTCAAAGGAATTCGCTCTGGAACTCTTTGATGCTCTAGGTCGTAAACGAAGGTTGAAGGTTGATAAGATCAATAAGGAAGAACTTTTCGAATTCTGGTCGCAAATTACGGATCAAAGTTTTGATTCACGACTCCAGATCTTCTTCGACATGGTGGACaagaatgaagatggaagaatcaccgaagaagaagtgaaagagATCATCATGTTAAGCGCTTCTGCAAATAAGTTATCCAGATTGAAGGAGCAGGCCGAAGAATATGCAGCTCTGATCATGGAAGAGTTAGACCCCGAAAGACTTGGCTACATCGAGTTATGGCAGCTGGAGACACTTCTTTTACAAAAGGACACGTATCTCAACTACAGCCAAGCTCTAAGCTATACAAGCCAAGCATTGAGCCAGAACCTACAGGGGCTAAGAAAGAAAAGTCCTATACATAGGATGAGCCGCAGATTTCTTTACTATTTGCAAGAGAATTGGAAGAGACTTTGGCTTTTAACATTGTGGGTTTGCATAATGATTGGGCTCTTCACGTGGAAGTTTATTCAGTACAAGAAAAAGGATGTTTTTCATATCATGGGTTACTGTCTTCTCACAGCCAAAGGTGCGGCCGAGACCCTGAAGTTCAACATGGCACTTATTCTCTTGCCCGTCTGTAGAAACACCATAACTTGGCTCAGGTCTACCAAGCTTTCTTATGTTGTACCTTTTGATGACAACATCAACTTCCATAAGACAATTGCTGGGGCAATTGTGATTGGTGTTATACTTCATGTTGGGGATCACCTTGCTTGTGATTTTCCAAGACTTGTAAGTTCGTCTGAAGCTGATTATCAGAAGTATTTGAAAGGTGTATTTGGTCGTCAAAAACCCAATTACGGAGACATAATTAAAGGGGTTGAGGCTGTGACTGGAATTTTGATGGTTACTTTGATGGCAATAGCATTTATCCTCGCAACAACATGGTTCAGAAGAAATCTCATTAAGCTGCCTAAACCATTTAATAAGCTCACTGGCTTCAATGCCTTCTGGTATTCACACCATCTGTTTGTCATTGTCTATGTCCTCCTCATCGTTCACGGTGTAAAACTTTACCTAGTGCACAAATGGCACTTGAAAACGACATGGATGTATCTCGCGGTTCCAGTTTTACTCTATGCATCAGAAAGAACGCTGAGATTATTTCGTTCTGGTTTTTATACAGTACGTCTAATAAAGGTTGCTATTTATCCTGGAAATGTTCTCACATTGCAAATGTCTAAGCCTCCTCAATTTCGCTACAAGAGCGGACAATACATGTTTGTACAGTGTCCCGCTGTTTCTCCGTTTGAGTGGCATCCATTTTCTATTACATCATCCCCTGGGGATGACTATCTGAGTGTTCACATTCGGCAACTGGGTGACTGGACTCAGGAACTTAAAAGGGTATTTTCTGAGGCTTGTGAGCCTCCTGTGTCTGGGAGGAGTGGCCTTCTCAGGGCTGATGAAACGACAAAGAAAAGTTTGCCGAAGTTAAAGATAGATGGACCTTACGGAGCGCCAGCTCAAGACTATAGAAAATATGACGTCTTGTTGCTGGTCGGTCTCGGTATAGGAGCAACTCCTTTCATCAGCATTCTGAAAGATCTTCTCAACAACATTATCAAAATGGAGGAGCTGGCGGATTCTGTCTCTGATACAAGTAGAGGATCAGACCTTAGCGTTGGGAGTACTGATTCACCATCTCTTAACAAAATTGCTCCAAAAAGGAAGAAAATACTGAAGACTACCAATGCTTATTTCTACTGGGTTACAAGAGAGCAAGGCTCTTTTGATTGGTTCAAAGGAGTCATGAATGAAGTGGCTGAGCTTGATCAAAGGGTATTATTGGTTATTGCAGACGATTTATTTATCTTATAG 2562 0.4422 MNDIPKHERRWASDTIPGKVTVSAGTSPGTESSSAGDEFVEVTLDLRDDDTIVLRSVEPANVISIDDSVAGSGYETPVSVPRSPSIRRNSSRGFRQFSQELKAEAVAKAKHFSQELRRFSWSHGQASRAFSSSSAQTGAGGSAGGGFETALAARALRKQRAQLDRTRSGAHKALRGLKFISSASKSNGVDAWNEVQKNFDRLAKDGFLHRIDFGQCIGMKDSKEFALELFDALGRKRRLKVDKINKEELFEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRKKSPIHRMSRRFLYYLQENWKRLWLLTLWVCIMIGLFTWKFIQYKKKDVFHIMGYCLLTAKGAAETLKFNMALILLPVCRNTITWLRSTKLSYVVPFDDNINFHKTIAGAIVIGVILHVGDHLACDFPRLVSSSEADYQKYLKGVFGRQKPNYGDIIKGVEAVTGILMVTLMAIAFILATTWFRRNLIKLPKPFNKLTGFNAFWYSHHLFVIVYVLLIVHGVKLYLVHKWHLKTTWMYLAVPVLLYASERTLRLFRSGFYTVRLIKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSSPGDDYLSVHIRQLGDWTQELKRVFSEACEPPVSGRSGLLRADETTKKSLPKLKIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLNNIIKMEELADSVSDTSRGSDLSVGSTDSPSLNKIAPKRKKILKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRVLLVIADDLFIL 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00485 853 MobiDBLite consensus disorder prediction 19 37 - -
Car06g00485 853 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 618 738 IPR017927 GO:0016491
Car06g00485 853 Pfam Ferric reductase NAD binding domain 742 841 IPR013121 GO:0016491
Car06g00485 853 Gene3D - 163 281 - -
Car06g00485 853 Coils Coil 291 311 - -
Car06g00485 853 PANTHER NADPH OXIDASE 24 844 - -
Car06g00485 853 MobiDBLite consensus disorder prediction 1 37 - -
Car06g00485 853 SUPERFAMILY Riboflavin synthase domain-like 621 734 IPR017938 -
Car06g00485 853 SUPERFAMILY EF-hand 192 342 IPR011992 -
Car06g00485 853 SFLD NADPH oxidase subgroup (NOX) 127 839 - -
Car06g00485 853 PRINTS Cytochrome B-245 heavy chain signature 724 737 IPR000778 GO:0016020|GO:0016491
Car06g00485 853 PRINTS Cytochrome B-245 heavy chain signature 524 547 IPR000778 GO:0016020|GO:0016491
Car06g00485 853 PRINTS Cytochrome B-245 heavy chain signature 747 764 IPR000778 GO:0016020|GO:0016491
Car06g00485 853 Gene3D Translation factors 608 701 - -
Car06g00485 853 CDD NOX_Duox_like_FAD_NADP 625 846 - -
Car06g00485 853 Pfam FAD-binding domain 621 735 IPR013112 GO:0016491
Car06g00485 853 Pfam Respiratory burst NADPH oxidase 162 263 IPR013623 GO:0004601|GO:0050664
Car06g00485 853 PANTHER RESPIRATORY BURST OXIDASE2 24 844 - -
Car06g00485 853 ProSitePatterns EF-hand calcium-binding domain. 273 285 IPR018247 -
Car06g00485 853 Pfam Ferric reductase like transmembrane component 423 579 IPR013130 -
Car06g00485 853 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 725 836 IPR039261 -
Car06g00485 853 CDD EFh 243 290 IPR002048 GO:0005509
Car06g00485 853 Gene3D - 733 849 IPR039261 -
Car06g00485 853 ProSiteProfiles EF-hand calcium-binding domain profile. 260 295 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00485 Car-Chr6 4885936 4895510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00485 9 850 Miscellaneous Gene Families AT1G64060 76.387 0.0 1344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00485 K13447 - gmx:100801077 1470.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00485 06 4885936 4895510 Car06g00485 06 4885936 4895510 ECH