Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00472 ATGGATTCTTCCACTCTCTCTCGCATAGGCTTAGCGGGACTAGCCGTCATGGGCCAAAACTTAGCCCTAAACATCGCCGAAAAAGGCTTCCCTATTTCCGTCTACAACCGCACAACCTCCAAAGTCGACGAAACCGTAGATCGGGCCCACCGTGAAGGTTCTCTCCCGTTAACCGGCCAATACAGCCCCCGCGAATTTGTCCTCTCTCTCCAACGTCCTAGATCAGTCATCATCCTCGTCAAAGCTGGCAATCCCGTCGACCAAACCATCGCCGCTCTCTCCGATCATATGGAGCCCGGTGACTGCATCATCGACGGCGGTAACGAATGGTACGAAAACACCGAACGAAGAATCCAACAAATCTCGAATAAAGGTATCCTTTATCTCGGTATGGGAGTATCCGGCGGCGAAGAAGGTGCTCGTAACGGTCCTTCCCTCATGCCCGGTGGGTCTTACCAAGCCTACAGCAACATCCAGGATATTCTCATGAAGGTCGCCGCTCAGGTTGAAGACGGTCCTTGTGTCACTTACATCGGCGAAGGAGGTGCCGGAAATTTCGTTAAAATGGTTCATAACGGTATTGAATACGGTGACATGCAACTTATTTCAGAAGCTTATGATGTTTTGAAGCACGTTGGTGGTTTATCGAATTCTGAACTCGCTGATATTTTTGCCGAATGGAACAGTGGTGAACTCGAGAGTTTCCTTGTAGAAATCACTGCTGATATTTTCAAAGTGAAAGATGATATTGGTGATGGTTATTTAGTTGATAAGATTTTGGATAAAACCGGTATGAAAGGTACCGGTAAATGGACAGTTCAACAAGCAGCCGAGCTTTCTGTTGCGGCGCCCACGATTGCCGCTTCGTTGGATTGTAGGTATTTGAGTGGGTTGAAGGAAGAGAGGGAGAATGCATCTGCGGTTTTGAAGGAAGCAGGGTTGAACGAGGAAGCAGGGTTTGTGAAAAGTGGGATTGATAAGAAGAGGTTAATTGATGATGTGAGACAAGCTTTGTATGCTTCAAAGATTTGTAGCTATGCTCAAGGGATGAATTTGTTGAGGGCAAAGAGTGACGAGAAAGGTTGGAATTTGAATTTAGGGGAATTAGCTAGGATTTGGAAAGGTGGGTGTATTATAAGAGCAGTGTTTTTGGATAGGATTAAGAAAGCTTATCAAAGGAACCCTAATTTGGCTAGTTTGATAGTGGATCCTGAATTTGCTAAGGAAATGGTGCAAAGACAAGGAGCATGGAGAAGGGTTGTTGGATTGGCTATATCGGCCGGGATTAGTACACCTGGAATGTGTGCTAGTCTTGCTTATTTTGATACTTATAGGAGAGCTAGGCTTCCTGCTAACCTTGTTCAGGCTCAGAGGGATTTGTTTGGAGCTCATACCTATGAGCGGCTCGATCGCCCCGGCGCGTTTCATACCGAGTGGACGAAAATTGCTCGTCAGAGTGGTACTGGTGTTGCTGCTCTTAATTGA 1485 0.4653 MDSSTLSRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVDRAHREGSLPLTGQYSPREFVLSLQRPRSVIILVKAGNPVDQTIAALSDHMEPGDCIIDGGNEWYENTERRIQQISNKGILYLGMGVSGGEEGARNGPSLMPGGSYQAYSNIQDILMKVAAQVEDGPCVTYIGEGGAGNFVKMVHNGIEYGDMQLISEAYDVLKHVGGLSNSELADIFAEWNSGELESFLVEITADIFKVKDDIGDGYLVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKEERENASAVLKEAGLNEEAGFVKSGIDKKRLIDDVRQALYASKICSYAQGMNLLRAKSDEKGWNLNLGELARIWKGGCIIRAVFLDRIKKAYQRNPNLASLIVDPEFAKEMVQRQGAWRRVVGLAISAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERLDRPGAFHTEWTKIARQSGTGVAALN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00472 494 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 184 479 IPR006114 GO:0004616|GO:0006098
Car06g00472 494 Coils Coil 295 315 - -
Car06g00472 494 SMART 6PGD_2 184 480 IPR006114 GO:0004616|GO:0006098
Car06g00472 494 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 8 179 IPR006115 GO:0050661
Car06g00472 494 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 1 489 IPR006183 GO:0004616
Car06g00472 494 Gene3D - 5 185 - -
Car06g00472 494 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 3, CHLOROPLASTIC 1 489 - -
Car06g00472 494 Gene3D - 448 481 - -
Car06g00472 494 PRINTS 6-phosphogluconate dehydrogenase signature 7 30 IPR006183 GO:0004616
Car06g00472 494 PRINTS 6-phosphogluconate dehydrogenase signature 72 101 IPR006183 GO:0004616
Car06g00472 494 PRINTS 6-phosphogluconate dehydrogenase signature 125 150 IPR006183 GO:0004616
Car06g00472 494 PRINTS 6-phosphogluconate dehydrogenase signature 173 201 IPR006183 GO:0004616
Car06g00472 494 PRINTS 6-phosphogluconate dehydrogenase signature 255 282 IPR006183 GO:0004616
Car06g00472 494 PRINTS 6-phosphogluconate dehydrogenase signature 369 391 IPR006183 GO:0004616
Car06g00472 494 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 181 IPR036291 -
Car06g00472 494 TIGRFAM gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 9 480 IPR006113 GO:0004616|GO:0006098
Car06g00472 494 Gene3D - 186 447 IPR013328 GO:0016491
Car06g00472 494 PIRSF 6PGD 1 487 IPR006113 GO:0004616|GO:0006098
Car06g00472 494 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 182 482 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00472 Car-Chr6 4749986 4752207 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00472 K00033 - gmx:100803740 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00472 06 4749986 4752207 Car06g00472 06 4749986 4752207 ECH