Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00468 ATGGGCGATAAAATGCATCTTAGTTTCCTTTTATTTGCCATGATTGGCTGCATTGTATTTGTATCTGCGAGTTCAACAACTCACATTGTCGGAGACAGTGTAGGTTGGAGTATGCCTAATTATCCTGAATTTTTCGAAGATTGGACCAAGAACAGAACCTTCGCCATTGGCGACATACTTCTTTTCCAATACAACCCGGGGATGAGCACCGTTGTTCAGGTAAACAAAAATGACTATGGTAATTGCACTACAAGAAATACCATTCACACTTTCTTCAGAGGGAACTCAAGTGTTCTTTTAGACAAACCTGGTGACTATTATTTCTTCTGTTCTGTCGGCAAGCGTTGTGAGGCAGGACAAAAACTTTGGGTTAATGTTCCTCAGGGTAACCCCTCCTCTCATTGA 405 0.4148 MGDKMHLSFLLFAMIGCIVFVSASSTTHIVGDSVGWSMPNYPEFFEDWTKNRTFAIGDILLFQYNPGMSTVVQVNKNDYGNCTTRNTIHTFFRGNSSVLLDKPGDYYFFCSVGKRCEAGQKLWVNVPQGNPSSH 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00468 134 PANTHER BLUE COPPER PROTEIN 3 127 IPR039391 GO:0009055
Car06g00468 134 Gene3D - 26 134 IPR008972 -
Car06g00468 134 ProSiteProfiles Phytocyanin domain profile. 26 128 IPR003245 GO:0009055
Car06g00468 134 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Car06g00468 134 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 3 127 - -
Car06g00468 134 SUPERFAMILY Cupredoxins 24 127 IPR008972 -
Car06g00468 134 Pfam Plastocyanin-like domain 36 120 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00468 Car-Chr6 4719172 4719973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00468 7 126 Miscellaneous Gene Families AT5G26330 36.885 2.12e-22 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00468 - - gmx:102660389 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00468 06 4719172 4719973 Car06g00468 06 4719172 4719973 ECH