Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00464 ATGGGGAAACATCACTTGAGAGAGTCTATAAAATCGCTCTTTGGAAGTCACATTGACCCTGATAAAGAAGAGCAGCTCCAGGGAGCTAAAACAGATTTTGAAGACAAAGTGAAAAGGGTGTTGAAACTTATTAAAGATGACAACCTTGAAGAGGATGGTACCCCAGTAGAACTTTTGGAAAGGGAACCACTTGCTGAATTGGTTGAGGATGTCCACAATCAATACCAATTGCTTTACGCACAATATAATCATCTGACAGGCGAGTTAAAGAAAAGGATCAAGGGCAAGCCAGAAAAGGGAAGTTCTTCATCTAGCTCTGACTCAGATTCAGATAATTCTTCAAAAAATAAAGACAGCAAAAATGGACAACCGCAATTTGAATTTCAAAATATAATTGATGGATTAAAGCAAGAACTTAATGTGGTGCATGTGGAAGTCGCTGATTTAAAGCGGAAGTTGGCAACTGCACAAGAAGAGAAGGAAGAAATAAATTCAAAATACCTAGCAGGACTGAACAAGATACAAGAAGCAGACAAAATTAATATGGATTTGAAAACTGATGCTGAGGCATTAGGGATTCAGAGATCAAAACTTTTGGCTGAGAATACTGAACTTAATAAGCAACTGGAGATTGCTGGTAAAGTAGAAGCTGAACTGAGTCAAAGATTGGAGGACATGAAGACAGAAAACAATAGCTTGGCCATGGAGAAAGAGACATCTCTTCGACAGATTGACGAGGAAAAGAAGGTTACAGAAGGCCTGAGAAACCTTCTCGATCAACTGAAAGATGATAAGGTAGTGATTGAGAAAGAACTACAAGCAGCAACAGATGAACTTTCTATTGTGAAGCAGCAATTGGAACATGCAGAACAGCAAATTACAAGTATAAGCCACAATCTGGAGGTTACAAAGGAAGAAAATGAATCATTAAAAGTGAAACTTTTACAGGCTTCAAATGAGGTTCAGCTGTCTCAGAACAGAATACAAGAATTTGTTGCTGAATCAAGTCAGTTAAAGGAGAAACTTGATGAGAGAGAAAAGGAAGTTTCAACCCTTACTCAGATGCATGAAGGGCATCAGATTGAGTCCTCAGATCTAATCAGGGAATTAGAATTACTGCAAAACCAGAAAAGAGATGCGGAGGAGCAACTTAAGAGCTGCACCACTGAAGCAAGGGAACTGGGGGAGCACAATTTAGGGCTGCGAAACCAAATTTCAGAACTTGAAATGAAGTCCAAAGAAAGAGAAGATGAACTATCTGCTACCATGGAGAAACTTAAAGTTAATGAGAGTGAGTCATCTTTCAAAATATCAGATTTGACATCTCAGGTAAACACTCTGCTGGCTGATATAGGCTCATTACAAACTCAGAAAAATGAACTGGAAGAGCAATTAACTTTTAAAAGTAATGAAGCTTCAACTAAAGTTGAAAGCATTACAAATGAGATGAATGCATTGCAGAAAGAAGTGGAGTCTCTACAACACCAGAAGTCTGACTTGGAAGTTCAGATAGGGGAAAAAATCGAAGAAAACTCCAAGTGTATAATTCAAATTCAAAGTCTGAAAGAGGAGGTTGACAGAAAAACTCTGGAACAAGAGAGACTGACGGAAGACAAAGAAAATTTAACAGAATCACTGCAAAACTATAAAAGAGATATGGAAGAGCAACTAAAGAGCTGCATCGCTGAAGCAAGAGAACTGGGAGAGCACAATTTAGGGCTGCGAAACCAAATTTCAGAACTTGAAATGAAGTCCAAAGAAAGAGAAGATGAACTAACTGCCATCCTGGAGAAACTAAAAGTTAATGAGAGTGAGTCATCTTTCAAAATATCAGATTTGACATCTCAGATAAACAATCTGCAGGCCGATATAGGTTCATTACAAGCTCAGAAAAATGAACTGGAAGAGCAATTAACTTTTAAAAGTAATGAAGCTTCAACTCAAGTCGAAAGCATTACAAATGAGTTGAATGCATTGCAGCAGGAAGTGGAGTCTCTACAACACCAGAAGTCTGACTTGGAAGTTCAGATAGGGGAAAAAATCCAAGAAAATTCCGAGTGTATAATTCAAATTCAAAGTCTGAAAGAGGAGGTTGACAGAAAAACTCTGGAAACAGAGAGACTGACGAAAGACAAAGAAAATTTAACAGAATCACTGCAAAACTATAAAAGAGATATGGAAGAGCAACTAAAGAGCTGCATCGCTGAAGCAACAGAACTGGGAGAGCACAATTTAGGGCTGCGAAACCAAATTTCAGAACTTGAAATGAAGTCCAAAGATGTAGCAGATGTACAATCTGCTATCCTGAAGAGACTAAAAGTTAAAGAGAGTGAGTCATCTTTAAAAATATCAGATTTGACATCTCAGATCAACAATCTGCAGGCTGATATAGGCTCATTACATGCTCAGAAAAATGAACTGGAAGAGCAATTAACTTTTAAAAGTAATGAAGCTTCAACTCAAGTCGAAAGCATTACAAATGAGGTGAATGCATTGCAGAAAGAAGTGGAGTCTCTACAACACCAGAAATCTGACTTGGAAGTTCAGATAGGGGAAAAAATCCAAGAAAATTCCGAGTGTATAATTCAAATTCAAAGTCTGAAAGAGGAGGTTGATAGAAAAACTCTGGAACAAAAGAGATTGATGGAAGACAAAGAAGATTTAACCATGCACATAAAGAACCTGGAATTTGAGATGAGCACTATAAAGAGCAACACTAGTGAAGATGAAGAGAAAATAAGGGCCAACATCCAAGAGATCAGTCATCTGACACAGCAGAAGTTGGAGCTATACGACAGAATAGCAGAATTGGAGAGAAAATCAGCAGAGATTGAATCAGAGTGCTCAGTTTTCAAGGATAAACTTATTAAGGCAGAGGAAGAGGGTTCAGCCCAAACGTCGGCCTGCAATGAACAAATTGAGAATCTTAAACGTGATTTGTTTTCTATGCAGAATAAGATGCAGGATTTAGATCAAATGAACGAAAATCTGAAGTTAAAGTTGGAATCCGCAGACAGCCAGAAGAGGGAAGTTGAAGAACAATTGAGAGCAAAAGACAGTACAATGAACACTTTAAAGCAAAAAATGAGTAAAGACAGAGAGCAAATAAAGATTAACATGGATGAGATCAGTCAACTGAGAATGGCGAACTTGGAGCTAGATGACAAAATAGATGAATTGGAGAGAAGATTAGCAGCAAGAGAATTTGATATCTCAGTTCTCCGGGATAAATATTTTAAGGAATGGGAGGAAGAGGTTTCAGGAAAAATAATTCCCTACAAAGCCCAAATTGAAGATCTGCAAAAGGACTTGCTTTCCTTACAGAAAACAAAAGAAGAATTGGAGCTCTCCAGCAAAAAAACCGGAAAAGAACATGCAAAATCCCTCAAAATAGTAGCTAAGTTGGAACGCCAAGTTGAAGACCTCAAAAGAGACCTGGAAGAGAAGGGAGATGAGATCAGCACTTTGCTTGAGAATGTCAGCAATCTTGAGGTAAAGCTTCGCCTGTCAAATCAAAAGCTCCGGGTTACAGAACAATTGCTAAGTGAAAAGGAAGAGAGTTTTAGAAAGGCGGAAAAGAAGTTTCAGGAAGATCAGAGAGCACTTGAAGACAGGATTGCTACTTTGTCATTTGAAGTTACTGCTAACAATAAAGCTTTTCATGAAACTATCACAAATGTTAAAGTGTGTGTCAATAGTGTGATATCTGGGATAGATACTGTAAGCTTGAAATTTTCTGACGACTGCAAAAATCATGAGAACCGCTTCTCAAACATCTCACATGAGCTTCAGGTTGCAAAAGAATATGTCGGGGAGATGAATAGGGAAAAGGGGCAATTAAAGAAAGACAAACACGGTTTGTTGGAGGAGCTGCAGGGTAAAAAGGAAGAGGAATTGATTCTGAGGGAGAAGGTTGAGAAGCTAGAGGCAACAGTTGTTGAACTTAAGAAGACCCTTGGAGAACTAGAGAAGATGGTGAAAGAGAAAGAGGAAGGTATATTGGACTTGGGAGAGGAAAAGAGGGAGGCTATTAAGCAGCTCTGTATATGGATTGATTATCACCGTGAGCGTTATGACTATCTCAAGGACATCATATCGAAGACTAGGAGGGGCCAGAGAGCAACATAA 4128 0.3849 MGKHHLRESIKSLFGSHIDPDKEEQLQGAKTDFEDKVKRVLKLIKDDNLEEDGTPVELLEREPLAELVEDVHNQYQLLYAQYNHLTGELKKRIKGKPEKGSSSSSSDSDSDNSSKNKDSKNGQPQFEFQNIIDGLKQELNVVHVEVADLKRKLATAQEEKEEINSKYLAGLNKIQEADKINMDLKTDAEALGIQRSKLLAENTELNKQLEIAGKVEAELSQRLEDMKTENNSLAMEKETSLRQIDEEKKVTEGLRNLLDQLKDDKVVIEKELQAATDELSIVKQQLEHAEQQITSISHNLEVTKEENESLKVKLLQASNEVQLSQNRIQEFVAESSQLKEKLDEREKEVSTLTQMHEGHQIESSDLIRELELLQNQKRDAEEQLKSCTTEARELGEHNLGLRNQISELEMKSKEREDELSATMEKLKVNESESSFKISDLTSQVNTLLADIGSLQTQKNELEEQLTFKSNEASTKVESITNEMNALQKEVESLQHQKSDLEVQIGEKIEENSKCIIQIQSLKEEVDRKTLEQERLTEDKENLTESLQNYKRDMEEQLKSCIAEARELGEHNLGLRNQISELEMKSKEREDELTAILEKLKVNESESSFKISDLTSQINNLQADIGSLQAQKNELEEQLTFKSNEASTQVESITNELNALQQEVESLQHQKSDLEVQIGEKIQENSECIIQIQSLKEEVDRKTLETERLTKDKENLTESLQNYKRDMEEQLKSCIAEATELGEHNLGLRNQISELEMKSKDVADVQSAILKRLKVKESESSLKISDLTSQINNLQADIGSLHAQKNELEEQLTFKSNEASTQVESITNEVNALQKEVESLQHQKSDLEVQIGEKIQENSECIIQIQSLKEEVDRKTLEQKRLMEDKEDLTMHIKNLEFEMSTIKSNTSEDEEKIRANIQEISHLTQQKLELYDRIAELERKSAEIESECSVFKDKLIKAEEEGSAQTSACNEQIENLKRDLFSMQNKMQDLDQMNENLKLKLESADSQKREVEEQLRAKDSTMNTLKQKMSKDREQIKINMDEISQLRMANLELDDKIDELERRLAAREFDISVLRDKYFKEWEEEVSGKIIPYKAQIEDLQKDLLSLQKTKEELELSSKKTGKEHAKSLKIVAKLERQVEDLKRDLEEKGDEISTLLENVSNLEVKLRLSNQKLRVTEQLLSEKEESFRKAEKKFQEDQRALEDRIATLSFEVTANNKAFHETITNVKVCVNSVISGIDTVSLKFSDDCKNHENRFSNISHELQVAKEYVGEMNREKGQLKKDKHGLLEELQGKKEEELILREKVEKLEATVVELKKTLGELEKMVKEKEEGILDLGEEKREAIKQLCIWIDYHRERYDYLKDIISKTRRGQRAT 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00464 1375 Coils Coil 783 856 - -
Car06g00464 1375 Coils Coil 132 166 - -
Car06g00464 1375 Coils Coil 864 898 - -
Car06g00464 1375 Coils Coil 1125 1166 - -
Car06g00464 1375 Coils Coil 610 683 - -
Car06g00464 1375 Coils Coil 691 732 - -
Car06g00464 1375 Coils Coil 1277 1332 - -
Car06g00464 1375 Coils Coil 1174 1201 - -
Car06g00464 1375 Coils Coil 920 961 - -
Car06g00464 1375 Coils Coil 518 598 - -
Car06g00464 1375 Coils Coil 244 425 - -
Car06g00464 1375 Coils Coil 444 510 - -
Car06g00464 1375 PANTHER COP1-INTERACTIVE PROTEIN 1 1130 1374 - -
Car06g00464 1375 PANTHER COP1-INTERACTIVE PROTEIN 1 992 1129 - -
Car06g00464 1375 PANTHER COP1-INTERACTIVE PROTEIN 1 717 1008 - -
Car06g00464 1375 PANTHER COP1-INTERACTIVE PROTEIN 1 1 550 - -
Car06g00464 1375 PANTHER COP1-INTERACTIVE PROTEIN 1 544 721 - -
Car06g00464 1375 PANTHER COP1-INTERACTIVE PROTEIN 1 717 1008 - -
Car06g00464 1375 PANTHER COP1-INTERACTIVE PROTEIN 1 992 1129 - -
Car06g00464 1375 PANTHER COP1-INTERACTIVE PROTEIN 1 1130 1374 - -
Car06g00464 1375 PANTHER COP1-INTERACTIVE PROTEIN 1 544 721 - -
Car06g00464 1375 PANTHER COP1-INTERACTIVE PROTEIN 1 1 550 - -
Car06g00464 1375 Coils Coil 973 1028 - -
Car06g00464 1375 Coils Coil 1043 1077 - -
Car06g00464 1375 Coils Coil 216 236 - -
Car06g00464 1375 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Car06g00464 1375 Coils Coil 1097 1117 - -
Car06g00464 1375 MobiDBLite consensus disorder prediction 1 31 - -
Car06g00464 1375 MobiDBLite consensus disorder prediction 92 124 - -
Car06g00464 1375 Gene3D - 1043 1230 - -
Car06g00464 1375 SUPERFAMILY Tropomyosin 925 1121 - -
Car06g00464 1375 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00464 Car-Chr6 4686375 4693215 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00464 - K20283 cam:101509420 1749.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00464 06 4686375 4693215 Car06g00464 06 4686375 4693215 ECH
Car08g00186 08 1462906 1465750 Car06g00464 06 4686375 4693215 PCT