Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00462 ATGAGGTTCGATTCTTCTTTCAACCAAAAAACTTACCTAATCAAATTGCTTCTCACTGTTTTCTTCTTTGGTCTCGCTTTCCGACTTCTCTTTTTTCACTCTCTACCGCCTCACATTTCACCTATTTTCGATTCTCCTTTACCTCGTAAATCTACCGTTTTAAGAGAACCTTCAATTTCATCTCTTTCTCAATTTCCGGAAATTGTTGCTGAAATTGAAGAAGACCAACTTTCTCCCACCGACATCGGGAAATGTGATTATTTTAGTGGAGATTGGGTACCGAACCCGTTGGGTCCGATGTATACGAATGAAACTTGTGACCTTATTGAATCTCATCAAAATTGTATGAAAAATGGGAGACCTGACAGGGAATTTTTGTATTGGAAGTGGGCCCCTAGAGACTGTGATTTGCCTATGTTTGATCCTCAGAGGTTTCTTAATATGATGCGTGGTAAAGTTTGGGCACTCATTGGTGATTCAATATCTAGGAACCATGTTCAGTCCTTGCTCTGTTCACTTTCTAAGGTAGAAAAAGCTGTCTTAGTCTATCACGATGAGGAATACAAGTCCAAAAGCTGGCACTTTCCGTCGTACAACTTCAGTATGTCAGTTATTTGGTCACCATTCCTTGTGGAAGCTGCTATTTTTGAAGATATAAATGGTGTTTCAAGTTCTGATGTTGAACTATATCTCGATAAACTTGACCGTGTTTGGAAGGATCAGTTCCTAAACTTTGATTACATTATTATTTCAACTGGCAAATGGTTTGTCAAATCTGCAATCTACTATGAAAACGACACTATATTGGGCTGCCACTCGTGTTCTAGTAACAAGAACTTCACAGAGCTAGGGTTTGGCTTCGCTTACCGCAAAGCCTTGAAACATGCCATGAACTTCATAGTGTCTTCCAATCACAAGGGCTTGATTATTTTCAGGACGTCCACACCCGACCATTTCGAAAACGGGGAGTGGTTTAGCGGGGGGACATGCAATAGAACAGCTCCGATTAAAGAAGGCGAGATGGAAATAAAGGATTTGCTCAGGGTTCTTCGAGACATTGAGTTAGAAGAGTTTAAAAAGGCAGCTTCTAAATCTTCGAGAACCGGAGTAAATTTCAAGCTTGCTGATTTTGTACCACTTTCGCTTTTGAGACCGGACGGGCATCCCGGTCCATACAGGCAGTTTCATCCCTTTGACAAGAACCAAAATGTTGAAGTTCAGAATGATTGTTTGCATTGGTGCTTACCTGGACCAATAGATTCTTGGAATGACATAATAATGAAAATGGTTGTCAGTGGATAA 1302 0.4048 MRFDSSFNQKTYLIKLLLTVFFFGLAFRLLFFHSLPPHISPIFDSPLPRKSTVLREPSISSLSQFPEIVAEIEEDQLSPTDIGKCDYFSGDWVPNPLGPMYTNETCDLIESHQNCMKNGRPDREFLYWKWAPRDCDLPMFDPQRFLNMMRGKVWALIGDSISRNHVQSLLCSLSKVEKAVLVYHDEEYKSKSWHFPSYNFSMSVIWSPFLVEAAIFEDINGVSSSDVELYLDKLDRVWKDQFLNFDYIIISTGKWFVKSAIYYENDTILGCHSCSSNKNFTELGFGFAYRKALKHAMNFIVSSNHKGLIIFRTSTPDHFENGEWFSGGTCNRTAPIKEGEMEIKDLLRVLRDIELEEFKKAASKSSRTGVNFKLADFVPLSLLRPDGHPGPYRQFHPFDKNQNVEVQNDCLHWCLPGPIDSWNDIIMKMVVSG 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00462 433 Pfam PMR5 N terminal Domain 84 136 IPR025846 -
Car06g00462 433 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 24 6 432 - -
Car06g00462 433 Coils Coil 336 356 - -
Car06g00462 433 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 137 429 IPR026057 GO:0016740
Car06g00462 433 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 6 432 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00462 Car-Chr6 4674010 4677193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00462 - - gmx:100816814 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00462 06 4674010 4677193 Car06g00462 06 4674010 4677193 ECH