Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00460 ATGTCAAACCCACCCAAGGAGAATCACCGTGACAACGACGACGCCGGAGCTGCTTTCGTCCTCGAGTCCAAAGGtgaatggtggcacgcgggttttcacttaacaacCGCGATTGTGGGGCCAACGATACTAACGCTGCCGTACGCGTTCAGAGGATTAGGGTGGGGGATTGGGATGTTGTGCTTAACGGTTATGGGTATTGTAACTTTCTACTCTTATGGTCTAATGTCCAAAGTTCTTGATCATTGCGAAAACTCCGGTCGCCGCCATATTCGTTTCCGGGAACTCGCCGCGGATGTTTTAGGGTCGGGATGGATGTTCTATTTTGTAATCTTTATTCAAACAGCAATCAATACTGGAGTTGGCGTAGGGGCTATTCTTCTTGCTGGTGAATGCCTTGAGATTGTGTACTCCAATATTGCACCTCATGGATCACTAAAATTGTACCACTTCATAGCAATGGTGACAGTGGTAATGATAGTTTTGTCTCAGCTTCCCACTTTCCATTCCCTGCGACACATCAACTTGTGTTCCCTTTTTCTCAGCCTCGGCTACACTTTCTTGGTTGTTGCTGCCTGTATTTATGCAGGTACATCCAAAAATGCCCCTCCAAGAGACTATTCTTTAGAAGCTGAGAAATCTTCAAGGGCCTTCAGTGCCTTCACCTCCATCTCTATAATTGCAGCAATATTTGGGAATGGTATATTACCTGAGATACAAGCAACTCTAGCACCTCCTGCAGCTGGAAAGATGGTAAAAGGTCTTACAATGTGTTATGCTGTAATTTTGGTGACATTTTACTCTGCTGCAGTTTCTGGGTATTGGGTATTTGGAAACAAGTCCAACTCAAACATTTTGAAGAGTTTGTTGCCTGATAGTGGACCTACTTTGGCTCCAACTTGGGTCCTTGGACTGGCTGTCATCTTTGTTCTTCTTCAACTCTTTGCAATCGGTCTGGTTTATTCTCAAGTTGCTTATGAGGTAATGGAGAAGAAATCGGCCGATGTGAAGCAAGGGATGTTTTCTAAAAGAAACCTCATTCCTCGCCTAATTCTTCGAACAATTTACATGATTTTCTGTGGATTTTTGGCAGCCATGTTGCCATTTTTCGGGGACATCAACGGCGTGGTTGGTGCTGTTGGTTTCATCCCTCTGGATTTTGTTCTGCCTATGATTCTATACAACAAAACACACAAGCCTCCAAAATCATCCTTGACTTATTTGATCAACATCTCAATCATGGTGGTGTTCACTGGTGCTGGAATCATGGGTGCATTCTCTTCCATAAGGAAATTAATTCTTGATGCCAATCAATTTAAGCTTTTTGGCAGTGATGTAGTGGATTGA 1347 0.4261 MSNPPKENHRDNDDAGAAFVLESKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGIGMLCLTVMGIVTFYSYGLMSKVLDHCENSGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGVGAILLAGECLEIVYSNIAPHGSLKLYHFIAMVTVVMIVLSQLPTFHSLRHINLCSLFLSLGYTFLVVAACIYAGTSKNAPPRDYSLEAEKSSRAFSAFTSISIIAAIFGNGILPEIQATLAPPAAGKMVKGLTMCYAVILVTFYSAAVSGYWVFGNKSNSNILKSLLPDSGPTLAPTWVLGLAVIFVLLQLFAIGLVYSQVAYEVMEKKSADVKQGMFSKRNLIPRLILRTIYMIFCGFLAAMLPFFGDINGVVGAVGFIPLDFVLPMILYNKTHKPPKSSLTYLINISIMVVFTGAGIMGAFSSIRKLILDANQFKLFGSDVVD 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00460 448 PANTHER GABA TRANSPORTER 2 ISOFORM X1-RELATED 8 442 - -
Car06g00460 448 PANTHER OS05G0424000 PROTEIN-RELATED 8 442 - -
Car06g00460 448 Pfam Transmembrane amino acid transporter protein 24 433 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00460 Car-Chr6 4657601 4662087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00460 1 448 Organic Solute Cotransporters AT5G41800 78.540 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00460 - - gmx:100815232 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00460 06 4657601 4662087 Car06g00460 06 4657601 4662087 ECH