Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00452 ATGGAAAAGCTTAAACAGCTCATTTGCATGTTTCCCCTGTTTTTTCTTCTATGCCCATCTTTCGCTTTTGCTGGCCATGACTACGGTCAAGCTCTAAGCAAGAGCATTATGTTCTTTGAAGCTCAGAGATCTGGTTTTCTTCCTAATAATCAAAGAGTATCATGGAGATCTCATTCTGGTCTTCAAGACGGTAAAGCCAGCGGAATAGATCTAGTGGGTGGGTACTATGATGCAGGGGACAATGTCAAATTTGGGTTACCAATGGCATTTACAGTTACAATGATGTCATGGAGTATCATTGAATATGGTAAACAAATGGCTACTAGTGGTGAGCTTGGTCATGCCATGGAAGCTGTGAAATGGGGTACTGATTACTTCATCAAAGCTCATCCTCAACCCAATGTTCTCTATGGAGAGGTAGGAGACGGGAACACTGACCACAAGTGTTGGCAAAGACCGGAGGATATGACCACTGACCGTCACGGTTACAAAATTGATCCAAACAATCCCGGGTCGGATCTCGCCGGAGAAACTGCCGCCGCTATGGCTGCTGCTTCCATTGTCTTCCGTCGCTCTAACCCTTCCTATTCCAAAGAACTCCTCAGCCATGCCTATCAGTTATTTGATTTTGCGGATAAATACAGAGGCAAATATGACAGCAGTATCACTGTTGCACAGAAGTACTACAGATCCATCAGTGGCTACAATGATGAATTGTTGTGGGCTGCTGCTTGGTTGTATCAAGCATCTAACGACCAATATTACTTGGATTACCTTGGTAGAAATGGTGACTCCATGGGTGGAACTGGTTGGCAAATGACTGAATTTAGTTGGGATGTTAAGTATCCTGGTGTTCAGACTTTAGTTGCCAAGTTTTTAATGCAAGGGAAAGCTGGAATTCATGCACCAGTGTTTGAAAAATATCTGCAAAAGTCTGAATTTTTCATGTGTTCATGCCTCGGAAAGGGTACTCGCAATGTTCAGAAGACACCTGGTGGCCTAATATACCGTCAGAGATGGAACAACTTGCAGTTTGTTACAAGTTCGTCCTTTTTAGCCACTGTTTACTCTGACTACCTTGCTTCTTCTCGTAGAAACTTGAGATGTTCTTCTGGCATTGTCGCTCCTTCTCAGCTTCTCTCCTTTGCAAAATCTCAGGTGGATTACATTCTTGGGGACAACCCAAGAGCAACAAGTTACATGGTGGGATATGGAAACAATTTCCCTCAAAGAGTTCACCATAGAGGTTCATCCATTGTTTCCATCAAGGAAAATCCTTCATTTGTTAGCTGCCGCGGAGGTTATGCTACTTGGTTTAGCAGCAAAAAGGGCAACACCAATATACTTACTGGTGCTATTGTTGGTGGACCCGATGCATATGATGACTTTGCTGATCATAGAGATAACTATGAACAAACTGAGCCAGCTACCTACAACAATGCTCCTCTTATTGGTATTCTTGCACGACTCAATGGCGGTCACGGTGGCTATAATCAGCTCCTTCCAGTTGTTGTTCCAGCTCCTAAGCCTTTTGTTCGCAAGCCGCATTCATCCCCCAAACCAAAGGAAACTCCATCCCCAGCTTCACAGTCAGGTCCAATTTCCGTTGAACAGAAAATGACCAACTCTTGGGTTGCTAATGGAAGAACTTATTATAGATACTCCACAATTGTGACTAACAAATCAACCAAGAATCTCAAGTCTCTCAATCTTTCAATTTTCAAGCTTTACGGTCCAATTTGGGGACTCACAAAGTTGGGTGATTCATACACATTCCCGTCATGGATCAGTTCGTTATCAGCTGGTAAAAGCCTTGAATTTGTCTACATCCATTCTACCTCTCCAGCAGATGTCTCAGTTGTGAACTACTTGTTGGCCTGA 1881 0.4338 MEKLKQLICMFPLFFLLCPSFAFAGHDYGQALSKSIMFFEAQRSGFLPNNQRVSWRSHSGLQDGKASGIDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMATSGELGHAMEAVKWGTDYFIKAHPQPNVLYGEVGDGNTDHKCWQRPEDMTTDRHGYKIDPNNPGSDLAGETAAAMAAASIVFRRSNPSYSKELLSHAYQLFDFADKYRGKYDSSITVAQKYYRSISGYNDELLWAAAWLYQASNDQYYLDYLGRNGDSMGGTGWQMTEFSWDVKYPGVQTLVAKFLMQGKAGIHAPVFEKYLQKSEFFMCSCLGKGTRNVQKTPGGLIYRQRWNNLQFVTSSSFLATVYSDYLASSRRNLRCSSGIVAPSQLLSFAKSQVDYILGDNPRATSYMVGYGNNFPQRVHHRGSSIVSIKENPSFVSCRGGYATWFSSKKGNTNILTGAIVGGPDAYDDFADHRDNYEQTEPATYNNAPLIGILARLNGGHGGYNQLLPVVVPAPKPFVRKPHSSPKPKETPSPASQSGPISVEQKMTNSWVANGRTYYRYSTIVTNKSTKNLKSLNLSIFKLYGPIWGLTKLGDSYTFPSWISSLSAGKSLEFVYIHSTSPADVSVVNYLLA 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00452 626 MobiDBLite consensus disorder prediction 511 534 - -
Car06g00452 626 Pfam Glycosyl hydrolase family 9 28 487 IPR001701 GO:0004553|GO:0005975
Car06g00452 626 Gene3D - 25 493 IPR012341 GO:0005975
Car06g00452 626 PANTHER ENDO-1,4-BETA-GLUCANASE 17 592 - -
Car06g00452 626 PANTHER ENDOGLUCANASE 17 592 - -
Car06g00452 626 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
Car06g00452 626 Pfam Carbohydrate binding domain CBM49 534 611 IPR019028 GO:0030246
Car06g00452 626 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 463 481 IPR033126 -
Car06g00452 626 SUPERFAMILY Six-hairpin glycosidases 25 503 IPR008928 GO:0005975
Car06g00452 626 SMART CBM49_2 534 614 IPR019028 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00452 Car-Chr6 4585917 4591616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00452 18 626 Glycoside Hydrolase AT1G64390 78.161 0.0 1003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00452 K01179 - gmx:100801949 1128.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00452 06 4585917 4591616 Car06g00452 06 4585917 4591616 ECH