Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00433 ATGGGGTGTTCTTGTACCAAACCGCGATTTCGGCATGAAGATCCGCCGGCAATTCTTGCTGCACAAACTTACTTTAGTATTTCTGAAATTGAAGCATTACATGATCTGTTCAAGAAATTAAGCAGTTCTATAGTCAATGATGGGCTAATTAGCAAAGAAGAATTTCAGCTTGGCTTATTTGGAAGCAGCAAGAAACGAAACCTCTTTGGTGACAGGGTTTTCCATTTATTTGACTCAAAAAATGATGGTGTGATAGATTTTGGAGAGTTTGTTGAAGCTTTAAGCGTCTTCCATCCAGCAGCACCCCAAGGACAAAAGGCAGCTTTTGCATTTCGACTCTATGATATATGGCAAAGAGGCTTTATTGAACCAGATGAGCTAAGAGAGATGATAGAGGCACTCCTAAGAGACTCTGATTTGGTTCTTTCTCATGATATAATTGAGGTCATAATTGATAAGGCCTTTAAAGAAGCTGATTTAAAAGGAGATGGAAAGCTTGATCCAGAGGAGTGGGAAAAATTTGTAGCTCGGAATCCATCCTTATTGAAGAATATGACAATTCCATATTTGAAGGATCTAAATATGCAGTTTCGTGGTTTTGAATTGATATCAGACATTGAAGATGACACAATCAGTACTCCATGA 645 0.3829 MGCSCTKPRFRHEDPPAILAAQTYFSISEIEALHDLFKKLSSSIVNDGLISKEEFQLGLFGSSKKRNLFGDRVFHLFDSKNDGVIDFGEFVEALSVFHPAAPQGQKAAFAFRLYDIWQRGFIEPDELREMIEALLRDSDLVLSHDIIEVIIDKAFKEADLKGDGKLDPEEWEKFVARNPSLLKNMTIPYLKDLNMQFRGFELISDIEDDTISTP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00433 214 PANTHER CALCINEURIN B 1 207 IPR045198 GO:0005509|GO:0019722|GO:0019900
Car06g00433 214 Gene3D - 16 209 - -
Car06g00433 214 ProSiteProfiles EF-hand calcium-binding domain profile. 71 100 IPR002048 GO:0005509
Car06g00433 214 Pfam EF hand 71 91 IPR002048 GO:0005509
Car06g00433 214 PRINTS Recoverin family signature 73 94 - -
Car06g00433 214 PRINTS Recoverin family signature 120 138 - -
Car06g00433 214 PRINTS Recoverin family signature 166 186 - -
Car06g00433 214 SUPERFAMILY EF-hand 18 195 IPR011992 -
Car06g00433 214 CDD EFh 106 176 IPR002048 GO:0005509
Car06g00433 214 Pfam EF-hand domain pair 106 174 IPR002048 GO:0005509
Car06g00433 214 ProSiteProfiles EF-hand calcium-binding domain profile. 102 137 IPR002048 GO:0005509
Car06g00433 214 ProSiteProfiles EF-hand calcium-binding domain profile. 146 181 IPR002048 GO:0005509
Car06g00433 214 PANTHER CALCINEURIN B-LIKE PROTEIN 5 1 207 - -
Car06g00433 214 SMART efh_1 69 97 IPR002048 GO:0005509
Car06g00433 214 SMART efh_1 106 134 IPR002048 GO:0005509
Car06g00433 214 SMART efh_1 150 178 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00433 Car-Chr6 4455879 4459110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00433 23 200 EF-hand Containing Proteins AT5G24270 61.798 3.10e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00433 K06268 - gmx:100808628 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00433 06 4455879 4459110 Car06g00433 06 4455879 4459110 ECH